RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 STXBP2Q15833 593 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 RASSF3Q86WH2 238 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 ACAP3Q96P50 834 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 ZNF302Q9NR11 478 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
CLN5-218ENST00000637397 KLRC4O43908 158 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 APRTP07741 180 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 DUOXA2Q1HG44 320 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 KCNK18Q7Z418 384 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SPATA20Q8TB22 786 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 P4HA2O15460 535 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 CASP2P42575 452 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SIX6OS1Q8N1H7 587 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 MSL3Q8N5Y2 521 aaKnown RBP16.75■□□□□ 0.27
CLN5-218ENST00000637397 SDCCAG3Q96C92 435 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 RPS6KC1Q96S38 1066 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
CLN5-218ENST00000637397 YY1AP1Q9H869 796 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 HAO1Q9UJM8 370 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 A0A0A6YYK5 440 aaPredicted RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 ADRA2BP18089 450 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 TYK2P29597 1187 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 PBX1P40424 430 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 OVGP1Q12889 678 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 HEATR6Q6AI08 1181 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 PSPC1Q8WXF1 523 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 FOXP3Q9BZS1 431 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 RIOX1Q9H6W3 641 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 RAB6BQ9NRW1 208 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 BIRC2Q13490 618 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 HIC1Q14526 733 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 IL17AQ16552 155 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 ALKBH8Q96BT7 664 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 PHTF1Q9UMS5 762 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 CNGA1P29973 690 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 CPA2P48052 419 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 SLC30A9Q6PML9 568 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 BTNL9Q6UXG8 535 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 THTPAQ9BU02 230 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 KIFC3Q9BVG8 833 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 FAM96AQ9H5X1 160 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 B2RBV5 119 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 OCRLQ01968 901 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 TAF1BQ53T94 588 aaPredicted RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 MIIPQ5JXC2 388 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 CCDC117Q8IWD4 279 aaPredicted RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 DLGAP2Q9P1A6 1054 aa16.74■□□□□ 0.27
CLN5-218ENST00000637397 XPO7Q9UIA9 1087 aaKnown RBP16.74■□□□□ 0.27
CLN5-218ENST00000637397 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 KRT10P13645 584 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 IFI35P80217 286 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 WDR72Q3MJ13 1102 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 TMEM143Q96AN5 459 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 GEMIN8Q9NWZ8 242 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 PIK3R2O00459 728 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 KRT4P19013 534 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 EEF1B2P24534 225 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 TAP1Q03518 808 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 SLC20A2Q08357 652 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 CCNYL1Q8N7R7 359 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 IPO11Q9UI26 975 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 KCNA3P22001 575 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 CENPCQ03188 943 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 PTK7Q13308 1070 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 NCOA4Q13772 614 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 ACAD10Q6JQN1 1059 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 ACSF2Q96CM8 615 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 DHX35Q9H5Z1 703 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.271e-8■■■□□ 16.6
CLN5-218ENST00000637397 KCNN4O15554 427 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 CST8O60676 142 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 DGAT1O75907 488 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 KPNA2P52292 529 aaKnown RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 SMTNL2Q2TAL5 461 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 ANO5Q75V66 913 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 RYBPQ8N488 228 aaPredicted RBP16.73■□□□□ 0.27
CLN5-218ENST00000637397 ICA1LQ8NDH6 482 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 ATXN7L3BQ96GX2 97 aa16.73■□□□□ 0.27
CLN5-218ENST00000637397 ZNF200P98182 395 aaPredicted RBP16.72■□□□□ 0.27
CLN5-218ENST00000637397 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
CLN5-218ENST00000637397 ZC3H7BQ9UGR2 993 aaKnown RBP16.72■□□□□ 0.27
CLN5-218ENST00000637397 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
CLN5-218ENST00000637397 CUL3Q13618 768 aa16.72■□□□□ 0.27
CLN5-218ENST00000637397 ACAD11Q709F0 780 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms