RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 LACTBL1A8MY62 500 aa15.03■□□□□ -0
PNKP-228ENST00000637325 C2CD4DB7Z1M9 353 aa15.03■□□□□ -0
PNKP-228ENST00000637325 XPOTO43592 962 aaKnown RBP15.03■□□□□ -0
PNKP-228ENST00000637325 RFPL2O75678 378 aa15.03■□□□□ -0
PNKP-228ENST00000637325 GCNT3O95395 438 aa15.03■□□□□ -0
PNKP-228ENST00000637325 IGFBP6P24592 240 aaPredicted RBP15.03■□□□□ -0
PNKP-228ENST00000637325 TKTP29401 623 aaKnown RBP15.03■□□□□ -0
PNKP-228ENST00000637325 MCM4P33991 863 aa15.03■□□□□ -0
PNKP-228ENST00000637325 LIN9Q5TKA1 542 aa15.03■□□□□ -0
PNKP-228ENST00000637325 ATL3Q6DD88 541 aa15.03■□□□□ -0
PNKP-228ENST00000637325 ADALQ6DHV7 355 aa15.03■□□□□ -0
PNKP-228ENST00000637325 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
PNKP-228ENST00000637325 CYP26C1Q6V0L0 522 aa15.03■□□□□ -0
PNKP-228ENST00000637325 ANKS3Q6ZW76 656 aa15.03■□□□□ -0
PNKP-228ENST00000637325 CCDC65Q8IXS2 484 aa15.03■□□□□ -0
PNKP-228ENST00000637325 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
PNKP-228ENST00000637325 C3orf58Q8NDZ4 430 aa15.03■□□□□ -0
PNKP-228ENST00000637325 KCNG4Q8TDN1 519 aa15.03■□□□□ -0
PNKP-228ENST00000637325 SMG7Q92540 1137 aaKnown RBP15.03■□□□□ -0
PNKP-228ENST00000637325 EDAQ92838 391 aa15.03■□□□□ -0
PNKP-228ENST00000637325 DHX58Q96C10 678 aa15.03■□□□□ -0
PNKP-228ENST00000637325 DNAJC19Q96DA6 116 aa15.03■□□□□ -0
PNKP-228ENST00000637325 C11orf16Q9NQ32 467 aa15.03■□□□□ -0
PNKP-228ENST00000637325 PANK4Q9NVE7 773 aa15.03■□□□□ -0
PNKP-228ENST00000637325 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.03■□□□□ -0
PNKP-228ENST00000637325 TTC26A0AVF1 554 aa15.02■□□□□ -0
PNKP-228ENST00000637325 PRR33A8MZF0 331 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ANKRD63C9JTQ0 380 aa15.02■□□□□ -0
PNKP-228ENST00000637325 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
PNKP-228ENST00000637325 MEFVO15553 781 aaPredicted RBP15.02■□□□□ -0
PNKP-228ENST00000637325 OR1D2P34982 312 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ME1P48163 572 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ZXDAP98168 799 aa15.02■□□□□ -0
PNKP-228ENST00000637325 AMPD3Q01432 767 aa15.02■□□□□ -0
PNKP-228ENST00000637325 PKP1Q13835 747 aa15.02■□□□□ -0
PNKP-228ENST00000637325 POSTNQ15063 836 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ZBTB41Q5SVQ8 909 aa15.02■□□□□ -0
PNKP-228ENST00000637325 SLC39A4Q6P5W5 647 aa15.02■□□□□ -0
PNKP-228ENST00000637325 LILRA6Q6PI73 481 aa15.02■□□□□ -0
PNKP-228ENST00000637325 OTOP3Q7RTS5 596 aa15.02■□□□□ -0
PNKP-228ENST00000637325 CD302Q8IX05 232 aa15.02■□□□□ -0
PNKP-228ENST00000637325 SYCP3Q8IZU3 236 aa15.02■□□□□ -0
PNKP-228ENST00000637325 IQUBQ8NA54 791 aa15.02■□□□□ -0
PNKP-228ENST00000637325 FEZF2Q8TBJ5 459 aa15.02■□□□□ -0
PNKP-228ENST00000637325 POMGNT1Q8WZA1 660 aa15.02■□□□□ -0
PNKP-228ENST00000637325 STAMQ92783 540 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ACCSQ96QU6 501 aa15.02■□□□□ -0
PNKP-228ENST00000637325 TNMDQ9H2S6 317 aa15.02■□□□□ -0
PNKP-228ENST00000637325 CUEDC2Q9H467 287 aa15.02■□□□□ -0
PNKP-228ENST00000637325 ZDHHC7Q9NXF8 308 aa15.02■□□□□ -0
PNKP-228ENST00000637325 FAM13BQ9NYF5 915 aa15.02■□□□□ -0
PNKP-228ENST00000637325 MTRRQ9UBK8 725 aa15.02■□□□□ -0
PNKP-228ENST00000637325 TUBGCP4Q9UGJ1 667 aa15.02■□□□□ -0
PNKP-228ENST00000637325 AGO2Q9UKV8 859 aaKnown RBP15.02■□□□□ -0
PNKP-228ENST00000637325 UBQLN1Q9UMX0 589 aaKnown RBP15.02■□□□□ -0
PNKP-228ENST00000637325 USTQ9Y2C2 406 aa15.02■□□□□ -0
PNKP-228ENST00000637325 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
PNKP-228ENST00000637325 H7C4K7 107 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 SYN3O14994 580 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 ADAM12O43184 909 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 ZMYND10O75800 440 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 ACOT2P49753 483 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 ENOX2Q16206 610 aaKnown RBP15.01□□□□□ -0.01
PNKP-228ENST00000637325 PTPN21Q16825 1174 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 PPM1LQ5SGD2 360 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 VARS2Q5ST30 1063 aaKnown RBP15.01□□□□□ -0.01
PNKP-228ENST00000637325 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
PNKP-228ENST00000637325 ZDHHC14Q8IZN3 488 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 TSPAN18Q96SJ8 248 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 PRKD2Q9BZL6 878 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 LIMD1Q9UGP4 676 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 FBXW11Q9UKB1 542 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 HCN4Q9Y3Q4 1203 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 BACE2Q9Y5Z0 518 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 CDY1Q9Y6F8 540 aa15.01□□□□□ -0.01
PNKP-228ENST00000637325 TISP43B9A030 160 aa15□□□□□ -0.01
PNKP-228ENST00000637325 FAM189A1O60320 539 aa15□□□□□ -0.01
PNKP-228ENST00000637325 CYP3A5P20815 502 aa15□□□□□ -0.01
PNKP-228ENST00000637325 GBP2P32456 591 aaPredicted RBP15□□□□□ -0.01
PNKP-228ENST00000637325 DNM1Q05193 864 aaKnown RBP15□□□□□ -0.01
PNKP-228ENST00000637325 ALCAMQ13740 583 aa15□□□□□ -0.01
PNKP-228ENST00000637325 RAB33AQ14088 237 aa15□□□□□ -0.01
PNKP-228ENST00000637325 SHC4Q6S5L8 630 aa15□□□□□ -0.01
PNKP-228ENST00000637325 TRIM67Q6ZTA4 783 aa15□□□□□ -0.01
PNKP-228ENST00000637325 STXBP4Q6ZWJ1 553 aa15□□□□□ -0.01
PNKP-228ENST00000637325 APPL2Q8NEU8 664 aa15□□□□□ -0.01
PNKP-228ENST00000637325 BEST2Q8NFU1 509 aa15□□□□□ -0.01
PNKP-228ENST00000637325 RHOBTB2Q9BYZ6 727 aa15□□□□□ -0.01
PNKP-228ENST00000637325 WDR6Q9NNW5 1121 aaKnown RBP15□□□□□ -0.01
PNKP-228ENST00000637325 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
PNKP-228ENST00000637325 CPSF3Q9UKF6 684 aaKnown RBP15□□□□□ -0.01
PNKP-228ENST00000637325 PCDHA7Q9UN72 937 aa15□□□□□ -0.01
PNKP-228ENST00000637325 ZDBF2Q9HCK1 2354 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 CLUHO75153 1309 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 FRMD3A2A2Y4 597 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 TMEM221A6NGB7 291 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 M0R296 226 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 POLR2DO15514 142 aaKnown RBP14.99□□□□□ -0.01
PNKP-228ENST00000637325 XYLBO75191 536 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 PPP1R37O75864 691 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms