RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 VCAM1P19320 739 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 CASP2P42575 452 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 IMPG1Q17R60 797 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 TIGD5Q53EQ6 642 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 C12orf60Q5U649 245 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 FKBP1CQ5VVH2 108 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 TMEM143Q96AN5 459 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 CLIC6Q96NY7 704 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 DCLK3Q9C098 648 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACNB4-239ENST00000636947 PCDHB5Q9Y5E4 795 aa8.56□□□□□ -1.04
CACNB4-239ENST00000636947 LRRD1A4D1F6 860 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 TTC36A6NLP5 189 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 GUCY2DQ02846 1103 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 RD3Q7Z3Z2 195 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 MORC4Q8TE76 937 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 HAUS4Q9H6D7 363 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 PHF20L1A8MW92 1017 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 TTI1O43156 1089 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 FAM200BP0CF97 657 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 ELNP15502 786 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 CMA1P23946 247 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 KRT20P35900 424 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 OAZ1P54368 228 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SH2D4BQ5SQS7 431 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 MCOLN3Q8TDD5 553 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 PPP1R2P1Q96PQ5 205 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 NDEL1Q9GZM8 345 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 NEUROG2Q9H2A3 272 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 ZMYM2Q9UBW7 1377 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 PREX2Q70Z35 1606 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 MBD5Q9P267 1494 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 TGFB3P10600 412 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 ATF2P15336 505 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 CASP14P31944 242 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 GUCA1AP43080 201 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SULT1E1P49888 294 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 TPI1P60174 286 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 C1QTNF8P60827 252 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 YWHAHQ04917 246 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 GPR142Q7Z601 462 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 CARNMT1Q8N4J0 409 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 LRRC71Q8N4P6 559 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 OTUB1Q96FW1 271 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 L3MBTL3Q96JM7 780 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 CERS4Q9HA82 394 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SLC39A10Q9ULF5 831 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 PSMD12O00232 456 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SH2B2O14492 632 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SYF2O95926 243 aaKnown RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 FKBP1AP62942 108 aaKnown RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 OTOP2Q7RTS6 562 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 NLGN2Q8NFZ4 835 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 SDCCAG3Q96C92 435 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 FANCEQ9HB96 536 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 ELOVL2Q9NXB9 296 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 POLLQ9UGP5 575 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 NDOR1Q9UHB4 597 aa8.55□□□□□ -1.04
CACNB4-239ENST00000636947 PRDM15P57071 1507 aaPredicted RBP8.55□□□□□ -1.04
CACNB4-239ENST00000636947 A0A087WZ62 844 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TRAV19A0A0A6YYK7 116 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 ORC4O43929 436 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 ZFXP17010 805 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 AXLP30530 894 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 RPS6P62753 249 aaKnown RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 RBL2Q08999 1139 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TMEM270Q6UE05 265 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TMTC3Q6ZXV5 915 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 CCDC197Q8NCU1 140 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 IRF2BPLQ9H1B7 796 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 UNC45AQ9H3U1 944 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 A0A087WUV0 522 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 ZNF263O14978 683 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 NCK2O43639 380 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TCP1P17987 556 aaKnown RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 GNL1P36915 607 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 HALP42357 657 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 HNRNPH2P55795 449 aaKnown RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 ZNF543Q08ER8 600 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 GRIK4Q16099 956 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 CHMP1BQ7LBR1 199 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 TAB3Q8N5C8 712 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-239ENST00000636947 AGBL1Q96MI9 1066 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
CACNB4-239ENST00000636947 H2AFYO75367 372 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms