RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 UBN1Q9NPG3 1134 aa10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 PRDM5Q9NQX1 630 aaPredicted RBP10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 SIX4Q9UIU6 781 aa10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 ITGA11Q9UKX5 1188 aa10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 LUC7L2Q9Y383 392 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 FHOD1Q9Y613 1164 aa10.34□□□□□ -0.75
CACNA1A-223ENST00000636058 LTBP2Q14767 1821 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ENPP3O14638 875 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 INPPL1O15357 1258 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 EOMESO95936 686 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ASS1P00966 412 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ITGB3P05106 788 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 CYP3A5P20815 502 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 KRT9P35527 623 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 JAM2P57087 298 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 IQCEQ6IPM2 695 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 CNKSR3Q6P9H4 555 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 GJB7Q6PEY0 223 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ARHGEF19Q8IW93 802 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ZNF397Q8NF99 534 aaPredicted RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 BEST2Q8NFU1 509 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ZFP42Q96MM3 310 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 NT5C1BQ96P26 610 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 PPP1R10Q96QC0 940 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 PANX2Q96RD6 677 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 GAD1Q99259 594 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 DNAJC7Q99615 494 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 PI4K2AQ9BTU6 479 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 XYLT2Q9H1B5 865 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 ELAC1Q9H777 363 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 RSAD1Q9HA92 442 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 TMEM161AQ9NX61 479 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 TUBGCP4Q9UGJ1 667 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 DNAJC12Q9UKB3 198 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 AJAP1Q9UKB5 411 aaPredicted RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 UBQLN1Q9UMX0 589 aaKnown RBP10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
CACNA1A-223ENST00000636058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 ARL5CA6NH57 179 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 XPOTO43592 962 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 OFD1O75665 1012 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 STAU1O95793 577 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 PFKMP08237 780 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 CSF2RAP15509 400 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 RAG1P15918 1043 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 FECHP22830 423 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 ATICP31939 592 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 AFF1P51825 1210 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 GUCY2FP51841 1108 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 MYL6P60660 151 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 NOP14P78316 857 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 GCNT1Q02742 428 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 LRMPQ12912 555 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 TRPC3Q13507 836 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 NAB2Q15742 525 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 SGSM1Q2NKQ1 1148 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 HS1BP3Q53T59 392 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 COL13A1Q5TAT6 717 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 PDXDC1Q6P996 788 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 RRAGAQ7L523 313 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 TMEM130Q8N3G9 435 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 TMEM199Q8N511 208 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 RNF169Q8NCN4 708 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 TAF4BQ92750 862 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 SYN2Q92777 582 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 ABHD8Q96I13 439 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 FAM81BQ96LP2 452 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 RPS6KC1Q96S38 1066 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 STK33Q9BYT3 514 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 GPR88Q9GZN0 384 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 NUCKS1Q9H1E3 243 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 KCNF1Q9H3M0 494 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 RNF19AQ9NV58 838 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 MIOSQ9NXC5 875 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 MYO6Q9UM54 1294 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 PLAGL2Q9UPG8 496 aa10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-223ENST00000636058 ANO9A1A5B4 782 aa10.31□□□□□ -0.76
CACNA1A-223ENST00000636058 F8VZ95 297 aa10.31□□□□□ -0.76
CACNA1A-223ENST00000636058 PIRO00625 290 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms