RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 CERKLQ49MI3 558 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC30A9Q6PML9 568 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 RBBP8NLQ8NC74 664 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 DNAJC9Q8WXX5 260 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TRIM11Q96F44 468 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 C9orf72Q96LT7 481 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TSC22D3Q99576 134 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TMEM117Q9H0C3 514 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 STOML1Q9UBI4 398 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 LNPEPQ9UIQ6 1025 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 DPPA5A6NC42 116 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 T-ENOLP0DO92 83 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 MYBL1P10243 752 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 ADRA2BP18089 450 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 RRM1P23921 792 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 MXRA7P84157 204 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 CDC42EP5Q6NZY7 148 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 RBM15Q96T37 977 aaKnown RBP eCLIP15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TUBB6Q9BUF5 446 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 COA1Q9GZY4 146 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 VCXQ9H320 206 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TRABDQ9H4I3 376 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 HSPBP1Q9NZL4 362 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TOM1O60784 492 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 MARK3P27448 753 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 CNGA1P29973 690 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 PTDSS1P48651 473 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 SNAP25P60880 206 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 RASA2Q15283 850 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 LLGL1Q15334 1064 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 FYB2Q5VWT5 728 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 HHIPL2Q6UWX4 724 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 KIAA0825Q8IV33 1275 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 C10orf82Q8WW14 230 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 IWS1Q96ST2 819 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 EHMT1Q9H9B1 1298 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 ZMYND8Q9ULU4 1186 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 NRAPQ86VF7 1730 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 EME2A4GXA9 379 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 PECAM1P16284 738 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 GM2AP17900 193 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 VPS41P49754 854 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 KLF1Q13351 362 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 ZRSR2Q15696 482 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 CLEC16AQ2KHT3 1053 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 DAW1Q8N136 415 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 MROH7Q68CQ1 1323 aa15.72■□□□□ 0.11
CACNA1A-220ENST00000635988 C2CD2LO14523 706 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 NDC80O14777 642 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 ECE2O60344 883 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 SMIM24O75264 130 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 SNUPNO95149 360 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 EPHB2P29323 1055 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 MUM1Q2TAK8 710 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 CYP4F22Q6NT55 531 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 MFN1Q8IWA4 741 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 DDX27Q96GQ7 796 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 PWWP2AQ96N64 755 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 NT5C1BQ96P26 610 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 CBWD1Q9BRT8 395 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 LXNQ9BS40 222 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 SPAG7O75391 227 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 ZWINTO95229 277 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 KRT15P19012 456 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 HHATQ5VTY9 493 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 KRT39Q6A163 491 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 IRGCQ6NXR0 463 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 ZNF449Q6P9G9 518 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 CCDC125Q86Z20 511 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 KCNQ5Q9NR82 932 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 CPSF2Q9P2I0 782 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 ZFP69BQ9UJL9 534 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 COQ4Q9Y3A0 265 aa15.71■□□□□ 0.11
CACNA1A-220ENST00000635988 ATRNL1Q5VV63 1379 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 PSTPIP1O43586 416 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 NDUFB10O96000 172 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 BMP3P12645 472 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 VHLP40337 213 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 CETN2P41208 172 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 PAPOLAP51003 745 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 GPC3P51654 580 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 ZBTB10Q96DT7 871 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 ZNF577Q9BSK1 485 aa15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 DENND2DQ9H6A0 471 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-220ENST00000635988 SSU72Q9NP77 194 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms