RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 ARPP19P56211 112 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 SEZ6Q53EL9 994 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 ARL6IP4Q66PJ3 421 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 TMEM161BQ8NDZ6 487 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 C18orf25Q96B23 403 aaPredicted RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 BICD1Q96G01 975 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
PTPN11-206ENST00000635652 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 ARHGEF3Q9NR81 526 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 CNTN3Q9P232 1028 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
PTPN11-206ENST00000635652 PROB1E7EW31 1015 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ABLIM1O14639 778 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 PRRG1O14668 218 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 SYN3O14994 580 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 MAPTP10636 758 aaKnown RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 UBA7P41226 1012 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 NBL1P41271 181 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 MCM2P49736 904 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 GPC5P78333 572 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ROR1Q01973 937 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 LARP1BQ659C4 914 aaKnown RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ZPBP2Q6X784 338 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ZNF461Q8TAF7 563 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 CALML4Q96GE6 196 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 AK8Q96MA6 479 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
PTPN11-206ENST00000635652 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 EP300Q09472 2414 aaPredicted RBP13.78□□□□□ -0.2
PTPN11-206ENST00000635652 H0YCG3 227 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 H7C4K7 107 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 LRG1P02750 347 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 POU2F2P09086 479 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
PTPN11-206ENST00000635652 MCM4P33991 863 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 PDCD11Q14690 1871 aaKnown RBP13.77□□□□□ -0.21
PTPN11-206ENST00000635652 TMEM119Q4V9L6 283 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 ARSHQ5FYA8 562 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 SLC8B1Q6J4K2 584 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 ASCL5Q7RTU5 278 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 ING5Q8WYH8 240 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 NKD2Q969F2 451 aaPredicted RBP13.77□□□□□ -0.21
PTPN11-206ENST00000635652 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 CACNA1IQ9P0X4 2223 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
PTPN11-206ENST00000635652 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 PRR23AA6NEV1 266 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
PTPN11-206ENST00000635652 ABLIM3O94929 683 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
PTPN11-206ENST00000635652 DCNP07585 359 aaKnown RBP13.76□□□□□ -0.21
PTPN11-206ENST00000635652 RHOP08100 348 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 CXCL8P10145 99 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 PTPN2P17706 415 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 LIG4P49917 911 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 SPAG1Q07617 926 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 MCL1Q07820 350 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 SNW1Q13573 536 aaKnown RBP13.76□□□□□ -0.21
PTPN11-206ENST00000635652 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 PHLDB3Q6NSJ2 640 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 MCRS1Q96EZ8 462 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 SHDQ96IW2 340 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 SUSD3Q96L08 255 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 KXD1Q9BQD3 176 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 ZHX3Q9H4I2 956 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 GVINP1Q7Z2Y8 2422 aa13.76□□□□□ -0.21
PTPN11-206ENST00000635652 ZNF292O60281 2723 aa13.75□□□□□ -0.21
PTPN11-206ENST00000635652 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
PTPN11-206ENST00000635652 SLC26A4O43511 780 aa13.75□□□□□ -0.21
PTPN11-206ENST00000635652 FAM13AO94988 1023 aa13.75□□□□□ -0.21
PTPN11-206ENST00000635652 CLTAP09496 248 aa13.75□□□□□ -0.21
PTPN11-206ENST00000635652 ATF2P15336 505 aa13.75□□□□□ -0.21
PTPN11-206ENST00000635652 MRPL58Q14197 206 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms