RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 USP6NLQ92738 828 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 CD101Q93033 1021 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PSMB7Q99436 277 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ACBD3Q9H3P7 528 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 SLITRK6Q9H5Y7 841 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 FAM124BQ9H5Z6 455 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 TUT1Q9H6E5 874 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 ZNF408Q9H9D4 720 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 IFT122Q9HBG6 1241 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 APOBEC3GQ9HC16 384 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 EHD2Q9NZN4 543 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 CTTNBP2NLQ9P2B4 639 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ANKFY1Q9P2R3 1169 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PACSIN2Q9UNF0 486 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 NUB1Q9Y5A7 615 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PCDHB4Q9Y5E5 795 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PCDHA3Q9Y5H8 950 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 A0A0U1RQG5 324 aaPredicted RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 A0A1B0GUA9 196 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CCDC66A2RUB6 948 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 MANSC4A6NHS7 340 aaPredicted RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 A6NJR5 290 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 INO80B-WBP1J3KQ70 363 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 GPR25O00155 361 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 KRIT1O00522 736 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ZEB2O60315 1214 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 IGHA2P01877 340 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 TNNC2P02585 160 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 GLI1P08151 1106 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ATICP31939 592 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 TNFSF9P41273 254 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 SLC1A1P43005 524 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 AARSP49588 968 aaKnown RBP eCLIP5.95□□□□□ -1.46
NEK3-211ENST00000629912 CLCN3P51790 818 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 EPHB4P54760 987 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 YWHAEP62258 255 aaKnown RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 NOP14P78316 857 aaKnown RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 CENPCQ03188 943 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 PTP4A2Q12974 167 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 MAP2K5Q13163 448 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 PCBP1Q15365 356 aaKnown RBP eCLIP5.95□□□□□ -1.46
NEK3-211ENST00000629912 DGKDQ16760 1214 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 SEZ6Q53EL9 994 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 MARCH8Q5T0T0 291 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ALS2CLQ60I27 953 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 EEF1DP3Q658K8 133 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 LMBRD2Q68DH5 695 aaPredicted RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 C8orf74Q6P047 294 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 MAATS1Q7Z4T9 603 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ZBTB33Q86T24 672 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ZNF410Q86VK4 478 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 NT5DC4Q86YG4 428 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CD302Q8IX05 232 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 EFCAB13Q8IY85 973 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 KIAA0319LQ8IZA0 1049 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 OR6J1Q8NGC5 347 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CCDC26Q8TAB7 109 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 NPLOC4Q8TAT6 608 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ZNF564Q8TBZ8 553 aaPredicted RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 SEC14L1Q92503 715 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CAVIN3Q969G5 261 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ANKRD36BP1Q96IX9 119 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 KRT12Q99456 494 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 NUP85Q9BW27 656 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 IMPG2Q9BZV3 1241 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 INO80BQ9C086 356 aaPredicted RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 ZNF518BQ9C0D4 1074 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CDT1Q9H211 546 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 GOLPH3Q9H4A6 298 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 ASB7Q9H672 318 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 MINDY3Q9H8M7 445 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 VRTNQ9H8Y1 702 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 RPF1Q9H9Y2 349 aaKnown RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 ACP6Q9NPH0 428 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.95□□□□□ -1.46
NEK3-211ENST00000629912 SMARCAL1Q9NZC9 954 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 CNOT8Q9UFF9 292 aaKnown RBP5.95□□□□□ -1.46
NEK3-211ENST00000629912 LCMT1Q9UIC8 334 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 Q9Y3F1 56 aa5.95□□□□□ -1.46
NEK3-211ENST00000629912 A0A087WZ62 844 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 FAM187AA6NFU0 413 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 LACTBL1A8MY62 500 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 B4GALT5O43286 388 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 SART1O43290 800 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 RAD51CO43502 376 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ZMYND10O75800 440 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 LSM8O95777 96 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 STAU1O95793 577 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 GJB1P08034 283 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MMP3P08254 477 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 IQCF3P0C7M6 154 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 STAG3L1P0CL83 205 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MYBL2P10244 700 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 COMTP21964 271 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 CDH5P33151 784 aaPredicted RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 CTNNA1P35221 906 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 DRG2P55039 364 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 RNASE9P60153 205 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms