RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CDC42EP4Q9H3Q1 356 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 A1CFQ9NQ94 594 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 CYP26B1Q9NR63 512 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 INTS9Q9NV88 658 aaKnown RBP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF112Q9UJU3 913 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 UMODL1Q5DID0 1318 aa10.26□□□□□ -0.77
IGHV3-54-201ENST00000622166 H0YHG0 523 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 DNM1LO00429 736 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATP2A1O14983 1001 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATG7O95352 703 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 GAS8O95995 478 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 GSTA1P08263 222 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SUPT20HL2P0C7V6 817 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 FGFR4P22455 802 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 RRM1P23921 792 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATP5DP30049 168 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 DSG3P32926 999 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SOX10P56693 466 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 KLF1Q13351 362 aaPredicted RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 MTMR2Q13614 643 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCNG2Q16589 344 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SUPT20HL1Q3ZLR7 823 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 TBC1D10BQ4KMP7 808 aaPredicted RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SLFN12LQ6IEE8 588 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 PLEKHA7Q6IQ23 1121 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SWSAP1Q6NVH7 229 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 MIS18BP1Q6P0N0 1132 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 CEP128Q6ZU80 1094 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 EXOC3L1Q86VI1 746 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 RHOT1Q8IXI2 618 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 LRRC34Q8IZ02 419 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 ABRAQ8N0Z2 381 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC114Q96M63 670 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 JPH2Q9BR39 696 aaPredicted RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 FAM213AQ9BRX8 229 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 HERPUD2Q9BSE4 406 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 PI4K2AQ9BTU6 479 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 NSRP1Q9H0G5 558 aaKnown RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SLC40A1Q9NP59 571 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 SLC9A2Q9UBY0 812 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 LGALS13Q9UHV8 139 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 RIPK3Q9Y572 518 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 MYH9P35579 1960 aaKnown RBP10.25□□□□□ -0.77
IGHV3-54-201ENST00000622166 HNRNPDLO14979 420 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 RGS20O76081 388 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 VNN1O95497 513 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 TTC4O95801 387 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 LDHAP00338 332 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 POTEJP0CG39 1038 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ATF2P15336 505 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ICAM3P32942 547 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ARL2P36404 184 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 NSFP46459 744 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 SCTRP47872 440 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 LIG4P49917 911 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ITGA8P53708 1063 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ACTR2P61160 394 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 NOMO3P69849 1222 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 PRKCEQ02156 737 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 XRCC4Q13426 336 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 DGKZQ13574 1117 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 CRELD2Q6UXH1 353 aaPredicted RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC60Q8IWA6 550 aaPredicted RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 UBR7Q8N806 425 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 EXD1Q8NHP7 514 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 IPO4Q8TEX9 1081 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 BICD1Q96G01 975 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 CGRRF1Q99675 332 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 TRAIPQ9BWF2 469 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 AS3MTQ9HBK9 375 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 MRPL47Q9HD33 250 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 JPH1Q9HDC5 661 aaPredicted RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 KLC4Q9NSK0 619 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 NINJ2Q9NZG7 142 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ASIC3Q9UHC3 531 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 ANAPC5Q9UJX4 755 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 AGO2Q9UKV8 859 aaKnown RBP10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 SCINQ9Y6U3 715 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 LCTP09848 1927 aa10.24□□□□□ -0.77
IGHV3-54-201ENST00000622166 SMIM23A6NLE4 172 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 OAS1P00973 400 aaKnown RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CALCAP01258 141 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 ABHD2P08910 425 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CLTAP09496 248 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 TBXAS1P24557 533 aaPredicted RBP10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 CHKAP35790 457 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 PIK3CAP42336 1068 aa10.23□□□□□ -0.77
IGHV3-54-201ENST00000622166 NAMPTP43490 491 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms