RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LMNB1P20700 586 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 CALRP27797 417 aaKnown RBP8.79□□□□□ -1
PTPDC1-204ENST00000620992 HSPA9P38646 679 aaKnown RBP8.79□□□□□ -1
PTPDC1-204ENST00000620992 DCAF4L1Q3SXM0 396 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 MCUR1Q96AQ8 359 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 ERLEC1Q96DZ1 483 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 FAM49BQ9NUQ9 324 aa8.79□□□□□ -1
PTPDC1-204ENST00000620992 RBAKQ9NYW8 714 aaPredicted RBP8.79□□□□□ -1
PTPDC1-204ENST00000620992 ADM5C9JUS6 153 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 CCDC188H7C350 402 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 DPYSL4O14531 572 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MAGOHP61326 146 aaKnown RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 SARNPP82979 210 aaKnown RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 PDZD4Q76G19 769 aaPredicted RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 MYCBPAPQ8TBZ2 947 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 FAM151AQ8WW52 585 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 FAM20AQ96MK3 541 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 TAAR1Q96RJ0 339 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 VCPKMTQ9H867 229 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 I3L4J1 428 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MEFVO15553 781 aaPredicted RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 GNAT1P11488 350 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MMS22LQ6ZRQ5 1243 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 PCGF5Q86SE9 256 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 LRRC57Q8N9N7 239 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SLC30A5Q8TAD4 765 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SCFD2Q8WU76 684 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 KAT2BQ92831 832 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 ELMO3Q96BJ8 720 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 RAB17Q9H0T7 212 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 TMBIM4Q9HC24 238 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SUCLA2Q9P2R7 463 aaPredicted RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 CNOT8Q9UFF9 292 aaKnown RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 SLC12A6Q9UHW9 1150 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 WNK3Q9BYP7 1800 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 FRMD3A2A2Y4 597 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 ACSL3O95573 720 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 EYA4O95677 639 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 ATICP31939 592 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SOX5P35711 763 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 SPIRE1Q08AE8 756 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 ZNF844Q08AG5 666 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 ITGB3BPQ13352 177 aaPredicted RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 ORC1Q13415 861 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MTMR3Q13615 1198 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 C2CD6Q53TS8 623 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MREGQ8N565 214 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 FMO2Q99518 471 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 FHDC1Q9C0D6 1143 aaPredicted RBP8.78□□□□□ -1
PTPDC1-204ENST00000620992 TRPC7Q9HCX4 862 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MLXIPLQ9NP71 852 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 AGAP1Q9UPQ3 857 aa8.78□□□□□ -1
PTPDC1-204ENST00000620992 MYH4Q9Y623 1939 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 PRR23AA6NEV1 266 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 ARHGAP42A6NI28 874 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 SRGAP2BP0DMP2 458 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 YWHABP31946 246 aaKnown RBP8.77□□□□□ -1
PTPDC1-204ENST00000620992 EPHX2P34913 555 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 FMO5P49326 533 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 NT5DC3Q86UY8 548 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 GABPB2Q8TAK5 448 aaPredicted RBP8.77□□□□□ -1
PTPDC1-204ENST00000620992 SNX24Q9Y343 169 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 TRIOBPQ9H2D6 2365 aa8.77□□□□□ -1
PTPDC1-204ENST00000620992 EMSYQ7Z589 1322 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CYP3A7-CYP3A51PA0A087WV96 503 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 M0QYV0 167 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 LCP1P13796 627 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CYP3A7P24462 503 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 JAK3P52333 1124 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 FYB2Q5VWT5 728 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 PPP4R4Q6NUP7 873 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 ARHGEF18Q6ZSZ5 1173 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 ANKRD13AQ8IZ07 590 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 LNX1Q8TBB1 728 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 HASPINQ8TF76 798 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CALR3Q96L12 384 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 PI4K2AQ9BTU6 479 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 TARS2Q9BW92 718 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 AGO2Q9UKV8 859 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 NR2E1Q9Y466 385 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 DAAM1Q9Y4D1 1078 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 F8VZ95 297 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 AGRPO00253 132 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 INHBAP08476 426 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CYP2C8P10632 490 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 PMLP29590 882 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 SREBF1P36956 1147 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 DR1Q01658 176 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 STMN2Q93045 179 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 L3MBTL3Q96JM7 780 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM118BQ9BPY3 351 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 GCOM2Q9BZD3 368 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 THAP2Q9H0W7 228 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 NYAP2Q9P242 653 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms