RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 THNSL1Q8IYQ7 743 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 HACE1Q8IYU2 909 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 PPM1KQ8N3J5 372 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 HERVK_113Q902F9 699 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 DESI2Q9BSY9 194 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 TRIM6Q9C030 488 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 CDT1Q9H211 546 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 HIPK3Q9H422 1215 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 ASB7Q9H672 318 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 PDE11AQ9HCR9 933 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 SIX2Q9NPC8 291 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 GTF2IRD1Q9UHL9 959 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 GINS2Q9Y248 185 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 EYSQ5T1H1 3165 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 KAT6AQ92794 2004 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 F8VZ95 297 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 DARSP14868 501 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 EIF4BP23588 611 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 JAM2P57087 298 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 YWHAEP62258 255 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ETF1P62495 437 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ARID5AQ03989 594 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 MTF1Q14872 753 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 IFI16Q16666 785 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ARHGAP44Q17R89 818 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ZACNQ401N2 412 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 CRELD2Q6UXH1 353 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 NYAP1Q6ZVC0 841 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 SESTD1Q86VW0 696 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 REXO1L1PQ8IX06 675 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ZNF668Q96K58 619 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ACAP3Q96P50 834 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 TSPAN18Q96SJ8 248 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 CXXC1Q9P0U4 656 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
TRAPPC3-210ENST00000617904 A0A1B0GUA9 196 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 TREHO43280 583 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 TSPAN1O60635 241 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 LCA5LO95447 670 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 ARF4P18085 180 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 CASQ1P31415 396 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 MAGEA1P43355 309 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 VAV2P52735 878 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 CCL23P55773 120 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 GNG11P61952 73 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 ADAM17P78536 824 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 GCNT1Q02742 428 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 BMS1Q14692 1282 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 NBPF20Q3BBV1 942 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 C1orf220Q5T0J3 134 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 SLC27A1Q6PCB7 646 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 USP38Q8NB14 1042 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 PLEKHO2Q8TD55 490 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 DHX38Q92620 1227 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 TAF4BQ92750 862 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 VWCEQ96DN2 955 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 PPP1R16BQ96T49 567 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 WNT8AQ9H1J5 351 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 PDZD7Q9H5P4 517 aa18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 TOPORSQ9NS56 1045 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-210ENST00000617904 USP27XA6NNY8 438 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 XPOTO43592 962 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 FGBP02675 491 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 C4BPAP04003 597 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 STAG3L1P0CL83 205 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 P4HA1P13674 534 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 HOXC8P31273 242 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 MRPS6P82932 125 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 SLC18A3Q16572 532 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 ZSWIM2Q8NEG5 633 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 LMO3Q8TAP4 145 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 ZBTB10Q96DT7 871 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 FAXDC2Q96IV6 333 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 POP1Q99575 1024 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 DNAI2Q9GZS0 605 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 PLEKHA5Q9HAU0 1116 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 LZTFL1Q9NQ48 299 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 TRPV2Q9Y5S1 764 aa18.04■□□□□ 0.48
TRAPPC3-210ENST00000617904 B4GALT5O43286 388 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 GPR32O75388 356 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 HLA-DRAP01903 254 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 USP8P40818 1118 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 GRM5P41594 1212 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 TFAMQ00059 246 aaKnown RBP18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 TUBB2AQ13885 445 aa18.03■□□□□ 0.48
TRAPPC3-210ENST00000617904 ENOX2Q16206 610 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms