RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 CACNA2D3Q8IZS8 1091 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 CYP4X1Q8N118 509 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 PPP1R16BQ96T49 567 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 HSD17B14Q9BPX1 270 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 C2orf49Q9BVC5 232 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 KCTD10Q9H3F6 313 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 PARVGQ9HBI0 331 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 SLC38A10Q9HBR0 1119 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 DKK3Q9UBP4 350 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 RASAL2Q9UJF2 1139 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 AJAP1Q9UKB5 411 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 PPP1R9AQ9ULJ8 1098 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MYPNQ86TC9 1320 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MCM3APO60318 1980 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 WDR46O15213 610 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 KDM1AO60341 852 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 EXOC3O60645 756 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 EYA4O95677 639 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MYCP01106 439 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 CALCAP01258 141 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 TGFB3P10600 412 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 XRCC5P13010 732 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MDH1P40925 334 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 GEMIN4P57678 1058 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 LRRC63Q05C16 580 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 EHHADHQ08426 723 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 PGM5Q15124 567 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 SH2D4BQ5SQS7 431 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MAP7D3Q8IWC1 876 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 UCMAQ8WVF2 138 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 CCT6BQ92526 530 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 ZBED3Q96IU2 234 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 POP1Q99575 1024 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 ACP6Q9NPH0 428 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 HOXC10Q9NYD6 342 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 HSFX1Q9UBD0 423 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 SALL4Q9UJQ4 1053 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 PLAAQ9Y263 795 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 SIK3Q9Y2K2 1263 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 TDRKHQ9Y2W6 561 aaKnown RBP5.92□□□□□ -1.46
CPNE4-214ENST00000617767 HYOU1Q9Y4L1 999 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 CAPN6Q9Y6Q1 641 aa5.92□□□□□ -1.46
CPNE4-214ENST00000617767 MYH9P35579 1960 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CCNE2O96020 404 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 PGK2P07205 417 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 MARK3P27448 753 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CSE1LP55060 971 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 KCNJ2P63252 427 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 DLG4P78352 724 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 VGLL4Q14135 290 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 ZCWPW2Q504Y3 356 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 SWSAP1Q6NVH7 229 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 SCYL3Q8IZE3 742 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 ANKRD35Q8N283 1001 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 FBXO41Q8TF61 875 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 SLC5A5Q92911 643 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 IFT43Q96FT9 208 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 RPGRIP1Q96KN7 1286 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 GBP5Q96PP8 586 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 DNAJC7Q99615 494 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 NAP1L4Q99733 375 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 NAPGQ99747 312 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CBWD1Q9BRT8 395 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 NAA15Q9BXJ9 866 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 TTYH3Q9C0H2 523 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 GPRC5DQ9NZD1 345 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 GCNT4Q9P109 453 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CIDEBQ9UHD4 219 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 INTUQ9ULD6 942 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 ASTN1O14525 1302 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 PSME4Q14997 1843 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 TBC1D12O60347 775 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 NOL4O94818 638 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 FTCDO95954 541 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 NR1D1P20393 614 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 SSTR3P32745 418 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CYLC1P35663 651 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 MAGEA1P43355 309 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CCT8P50990 548 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 ALDH5A1P51649 535 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CDK17Q00537 523 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 KIF5AQ12840 1032 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 ORC2Q13416 577 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CNPY1Q3B7I2 92 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 SEZ6Q53EL9 994 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 CCNI2Q6ZMN8 369 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 KDM7AQ6ZMT4 941 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 RUFY4Q6ZNE9 571 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 C1orf186Q6ZWK4 172 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 C11orf74Q86VG3 221 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 GDAP1Q8TB36 358 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 KIAA1683Q9H0B3 1180 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
CPNE4-214ENST00000617767 EHMT1Q9H9B1 1298 aa5.91□□□□□ -1.46
CPNE4-214ENST00000617767 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms