RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DCPSQ96C86 337 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 PPP1R16BQ96T49 567 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 UBIAD1Q9Y5Z9 338 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CST8O60676 142 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CCNE2O96020 404 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 MT-ND3P03897 115 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 LONRF1Q17RB8 773 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ARHGEF19Q8IW93 802 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 FAM71AQ8IYT1 594 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 SCYL3Q8IZE3 742 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 MICAL1Q8TDZ2 1067 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 GDF3Q9NR23 364 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CYP26B1Q9NR63 512 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 KIF1AQ12756 1690 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 SNED1Q8TER0 1413 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 LRRC37A3O60309 1634 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 VWA5AO00534 786 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZC3H11AO75152 810 aaKnown RBP eCLIP5.98□□□□□ -1.451e-10■□□□□ 9.2
SYNCRIP-204ENST00000616122 CAND2O75155 1236 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 KRT10P13645 584 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CHN1P15882 459 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CCNA1P78396 465 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 EPM2AIP1Q7L775 607 aaPredicted RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 NIPA1Q7RTP0 329 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 RHPN2Q8IUC4 686 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 LRRC71Q8N4P6 559 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 GDAP1Q8TB36 358 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ANKRD36BP1Q96IX9 119 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 EFCC1Q9HA90 598 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ETNK1Q9HBU6 452 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 KLHL11Q9NVR0 708 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 STRIP2Q9ULQ0 834 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ABCC6O95255 1503 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 VIRMAQ69YN4 1812 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ANKRD63C9JTQ0 380 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 OPLAHO14841 1288 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 OGTO15294 1046 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 SSTR3P32745 418 aaPredicted RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 MRPS9P82933 396 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ACTN3Q08043 901 aaPredicted RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 NFX1Q12986 1120 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZBED8Q8IZ13 594 aa5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 CDC42EP4Q9H3Q1 356 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 RPF1Q9H9Y2 349 aaKnown RBP5.98□□□□□ -1.45
SYNCRIP-204ENST00000616122 KNTC1P50748 2209 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TTC4O95801 387 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TXNP10599 105 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SDC4P31431 198 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ARL4CP56559 192 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CNTN2Q02246 1040 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 STAT4Q14765 748 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ACAD10Q6JQN1 1059 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CCDC60Q8IWA6 550 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PPFIBP2Q8ND30 876 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 RSRC1Q96IZ7 334 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 RANBP17Q9H2T7 1088 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZWILCHQ9H900 591 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 AKT3Q9Y243 479 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PCDHA2Q9Y5H9 948 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 WDR91A4D1P6 747 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 YDJCA8MPS7 323 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 GOLGA8MH3BSY2 632 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CES2O00748 559 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PRPSAP2O60256 369 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 KRT37O76014 449 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ADRB2P07550 413 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PDGFRAP16234 1089 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 MSH2P43246 934 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ARSEP51690 589 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 NR1H3Q13133 447 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PGM5Q15124 567 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TTMPQ5BVD1 217 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 DPY19L2Q6NUT2 758 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CATSPER4Q7RTX7 472 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 APBB1IPQ7Z5R6 666 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 FOXP3Q9BZS1 431 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TMBIM4Q9HC24 238 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZBED1O96006 694 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 RPS12P25398 132 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ITGA8P53708 1063 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 IFI35P80217 286 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PDE1BQ01064 536 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PPATQ06203 517 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CYP24A1Q07973 514 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PDIA2Q13087 525 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SPARCL1Q14515 664 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PPP2R5DQ14738 602 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CDO1Q16878 200 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SPOPLQ6IQ16 392 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 DPP9Q86TI2 863 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 C12orf56Q8IXR9 622 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 C4orf33Q8N1A6 199 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SAMD3Q8N6K7 520 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 C1orf131Q8NDD1 294 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SNF8Q96H20 258 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZBTB45Q96K62 511 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 AGO4Q9HCK5 861 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms