RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 POGKQ9P215 609 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ZNF70Q9UC06 446 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 PHLDB1Q86UU1 1377 aa3.45□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATRNL1Q5VV63 1379 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 MARCH11A6NNE9 402 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 LEFTY2O00292 366 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 ADCY6O43306 1168 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 AGXTP21549 392 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 WASP42768 502 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 CCT2P78371 535 aaKnown RBP3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 PPP3CAQ08209 521 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 BEAN1Q3B7T3 259 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 FAM102AQ5T9C2 384 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 ANKS6Q68DC2 871 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 OTUD7BQ6GQQ9 843 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 Q6ZVL8 140 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 SEM1Q6ZVN7 128 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 SYT12Q8IV01 421 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 CMIPQ8IY22 773 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 PQLC1Q8N2U9 271 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 RNF169Q8NCN4 708 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 COG1Q8WTW3 980 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 FUBP3Q96I24 572 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 ZNF768Q9H5H4 540 aaKnown RBP3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 MYH16Q9H6N6 1097 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 KMT5AQ9NQR1 393 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 SAP30BPQ9UHR5 308 aaKnown RBP3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATP11BQ9Y2G3 1177 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 FPGT-TNNI3KV9GXZ4 949 aa3.44□□□□□ -1.86
HMGB1P24-202ENST00000615653 GPR32O75388 356 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 NCR1O76036 304 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 POMCP01189 267 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 RAP2AP10114 183 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ALAS1P13196 640 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 OSMP13725 252 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATP5JP18859 108 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 KRT85P78386 507 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 NOMO1Q15155 1222 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATP2B3Q16720 1220 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 PDCD4Q53EL6 469 aaKnown RBP3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 GORABQ5T7V8 394 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 AGAP9Q5VTM2 703 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 DDX42Q86XP3 938 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 CNTD1Q8N815 330 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 REPS2Q8NFH8 660 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ZBTB9Q96C00 473 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 MRI1Q9BV20 369 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 DMRT3Q9NQL9 472 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 SLC5A4Q9NY91 659 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ANKFY1Q9P2R3 1169 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 DKK2Q9UBU2 259 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 ATP8A1Q9Y2Q0 1164 aa3.43□□□□□ -1.86
HMGB1P24-202ENST00000615653 CADPSQ9ULU8 1353 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 DRGXA6NNA5 263 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 CFIP05156 583 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 HKR1P10072 659 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 PTMSP20962 102 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 GCSHP23434 173 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 DDX6P26196 483 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 ALDH1A3P47895 512 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 CHN2P52757 468 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 SLC16A1P53985 500 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 RAP2BP61225 183 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 FAM189BP81408 668 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 SETQ01105 290 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 GUCY1B3Q02153 619 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 ABHD17BQ5VST6 288 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 AFMIDQ63HM1 303 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 METRNLQ641Q3 311 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 CMTR2Q8IYT2 770 aaKnown RBP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 SH2D3CQ8N5H7 860 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 CPEB3Q8NE35 698 aaKnown RBP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 SLC35B2Q8TB61 432 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 SLC9A6Q92581 669 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 CAVIN3Q969G5 261 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 C7orf25Q9BPX7 421 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 RNPEPQ9H4A4 650 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 KLHL11Q9NVR0 708 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 AJAP1Q9UKB5 411 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 TLK1Q9UKI8 766 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 USP15Q9Y4E8 981 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 PCDHGA2Q9Y5H1 932 aa3.42□□□□□ -1.86
HMGB1P24-202ENST00000615653 ALG1L2C9J202 215 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 MARCH6O60337 910 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 CDKL5O76039 1030 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 NDUFA10O95299 355 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 FOSP01100 380 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 GSPT1P15170 499 aaKnown RBP3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 MTM1Q13496 603 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 SEPT2Q15019 361 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 INAVAQ3KP66 663 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 SPDYE7PQ495Y7 208 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 SYDE2Q5VT97 1194 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 MIGA2Q7L4E1 593 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 FAM43AQ8N2R8 423 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 C1orf162Q8NEQ5 155 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 OR56A1Q8NGH5 318 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 CAGE1Q8TC20 777 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms