RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HEMGNQ9BXL5 484 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 TADA2AO75478 443 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SLFN12LQ6IEE8 588 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 PIDD1Q9HB75 910 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 ETAA1Q9NY74 926 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SNX12Q9UMY4 172 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 IRS2Q9Y4H2 1338 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CASTOR2A6NHX0 329 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CYP26A1O43174 497 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SUPT20HL2P0C7V6 817 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 ERFP50548 548 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CRHR2Q13324 411 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 DRAP1Q14919 205 aaPredicted RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CCDC38Q502W7 563 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 RASIP1Q5U651 963 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 DENND2CQ68D51 928 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 FAXDC2Q96IV6 333 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 VPS33BQ9H267 617 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 TYW1Q9NV66 732 aaKnown RBP11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CAPN6Q9Y6Q1 641 aa11.52□□□□□ -0.57
FAM3A-221ENST00000612856 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 SAT1P21673 171 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 NPTX2P47972 431 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 CPT1AP50416 773 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 FSCN1Q16658 493 aaKnown RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF513Q8N8E2 541 aaPredicted RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 C4orf32Q8N8J7 132 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 GOLPH3Q9H4A6 298 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 INTS9Q9NV88 658 aaKnown RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 PCDHA13Q9Y5I0 950 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 C17orf102A2RUQ5 167 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 GLI1P08151 1106 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 PTGER2P43116 358 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 GFPT1Q06210 699 aaPredicted RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 LRRC14Q15048 493 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 MUM1Q2TAK8 710 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.571e-8■■■□□ 17.1
FAM3A-221ENST00000612856 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 AGO4Q9HCK5 861 aaKnown RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 TXNRD2Q9NNW7 524 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 PVALEFA0A1B0GWK0 134 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 DNM1LO00429 736 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 SYCP2LQ5T4T6 812 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 RWDD4Q6NW29 188 aaKnown RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
FAM3A-221ENST00000612856 PRCCQ92733 491 aaPredicted RBP11.51□□□□□ -0.57
FAM3A-221ENST00000612856 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 FAM237AA0A1B0GTK4 181 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ESYT2A0FGR8 921 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ATP6V1G2O95670 118 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 GPRASP2Q96D09 838 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 DDX23Q9BUQ8 820 aaKnown RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 TUFT1Q9NNX1 390 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 COL20A1Q9P218 1284 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 GRIN2DO15399 1336 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 RGS16O15492 202 aaPredicted RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 SLITRK3O94933 977 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 MMEP08473 750 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 CTCFP49711 727 aaPredicted RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 MRPS9P82933 396 aaKnown RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 TRADDQ15628 312 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 RNF10Q8N5U6 811 aaKnown RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 SPIRE2Q8WWL2 714 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
FAM3A-221ENST00000612856 KLHL11Q9NVR0 708 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 AMFRQ9UKV5 643 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 SNED1Q8TER0 1413 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 M0QYV0 167 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 LCP1P13796 627 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 KIF11P52732 1056 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 PRKCZQ05513 592 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 NME3Q13232 169 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ANKRD20A8PQ5CZ79 823 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 SPOPLQ6IQ16 392 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 VSIG10LQ86VR7 867 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 BEST2Q8NFU1 509 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms