RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ATP9AO75110 1047 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
HLCS-207ENST00000612277 PPP3CCP48454 512 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 NUDT2P50583 147 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 CACNA2D1P54289 1103 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 BCAR1P56945 870 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 ICA1Q05084 483 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 PTGISQ16647 500 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
HLCS-207ENST00000612277 LRRC8DQ7L1W4 858 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 TASP1Q9H6P5 420 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 CDH16O75309 829 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 HIST1H2AGP0C0S8 130 aaPredicted RBP12.99□□□□□ -0.33
HLCS-207ENST00000612277 HIST1H2ADP20671 130 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 SDC4P31431 198 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 RPS7P62081 194 aaKnown RBP12.99□□□□□ -0.33
HLCS-207ENST00000612277 ITIH4Q14624 930 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 DLGAP5Q15398 846 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 ANKRD40Q6AI12 368 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
HLCS-207ENST00000612277 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 HIST1H2AHQ96KK5 128 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 HIST1H2AJQ99878 128 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 ECSITQ9BQ95 431 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 H2AFJQ9BTM1 129 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 POLR1BQ9H9Y6 1135 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 SLC9A2Q9UBY0 812 aa12.99□□□□□ -0.33
HLCS-207ENST00000612277 MAP3K19Q56UN5 1328 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ATP9BO43861 1147 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SMNDC1O75940 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLCS-207ENST00000612277 EIF2S3P41091 472 aaKnown RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 SYCP2LQ5T4T6 812 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CYFIP1Q7L576 1253 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 FLT4P35916 1363 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SYNCRIPO60506 623 aaKnown RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 SEMA3DO95025 777 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CPA2P48052 419 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CSNK2BP67870 215 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PPIDQ08752 370 aaKnown RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 THEM5Q8N1Q8 247 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 LRRC1Q9BTT6 524 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 TRPC5OSA6NMA1 111 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PSMD3O43242 534 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 FAM58BPP0C7Q3 252 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ACTR2P61160 394 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 EPS8Q12929 822 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ALFQ53S48 1182 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 EFHC2Q5JST6 749 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 TTC39BQ5VTQ0 682 aaPredicted RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 LAYNQ6UX15 382 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CENPLQ8N0S6 344 aaPredicted RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SH3GLB1Q9Y371 365 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SERPIND1P05546 499 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SYTL3Q4VX76 610 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 C4orf33Q8N1A6 199 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 C3orf20Q8ND61 904 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ATL2Q8NHH9 583 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 OSBPL5Q9H0X9 879 aaPredicted RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 HMG20AQ9NP66 347 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 UBA2Q9UBT2 640 aaPredicted RBP12.98□□□□□ -0.33
HLCS-207ENST00000612277 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 CSADQ9Y600 493 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 PFASO15067 1338 aa12.98□□□□□ -0.33
HLCS-207ENST00000612277 E9PBE3 544 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 HSMCR30P0CW71 290 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 DDB1Q16531 1140 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 SVOPQ8N4V2 548 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 DPP10Q8N608 796 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 DCUN1D1Q96GG9 259 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 C11orf70Q9BRQ4 267 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PACSIN1Q9BY11 444 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 MAPKAPK2P49137 400 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ABATP80404 500 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 GTF2H3Q13889 308 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 PROM2Q8N271 834 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms