RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 NECAB3Q96P71 396 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-226ENST00000611736 CBWD1Q9BRT8 395 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 FAM213AQ9BRX8 229 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 PCIF1Q9H4Z3 704 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 EXOC1Q9NV70 894 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 VWA8A3KMH1 1905 aa28.29■■■□□ 2.12
VEGFA-226ENST00000611736 I3L4J1 428 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 TULP1O00294 542 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 TEX28O15482 410 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 ADRB2P07550 413 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 PRR29P0C7W0 189 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 EPCAMP16422 314 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 GARTP22102 1010 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 RPL9P32969 192 aaKnown RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 SMAD4Q13485 552 aaKnown RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 JADE1Q6IE81 842 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 ANKRD54Q6NXT1 300 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 ARMCX5Q6P1M9 558 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 PRSS55Q6UWB4 352 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 CRELD2Q6UXH1 353 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 KRBA2Q6ZNG9 492 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 NELFCDQ8IXH7 590 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 ZNF507Q8TCN5 953 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 NOC3LQ8WTT2 800 aaKnown RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 SLC22A17Q8WUG5 538 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 SCFD1Q8WVM8 642 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 TTPALQ9BTX7 342 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 APOL5Q9BWW9 433 aa28.28■■■□□ 2.12
VEGFA-226ENST00000611736 UBQLN1Q9UMX0 589 aaKnown RBP28.28■■■□□ 2.12
VEGFA-226ENST00000611736 UBE4BO95155 1302 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 GOLGA8IPA6NC78 632 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 GOLGA8JA6NMD2 632 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 MBTPS2O43462 519 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 NFICP08651 508 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 BRCC3P46736 316 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 GUCY2FP51841 1108 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 KMT5BQ4FZB7 885 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 PPFIBP1Q86W92 1011 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 CD302Q8IX05 232 aa28.27■■■□□ 2.12
VEGFA-226ENST00000611736 UHRF1Q96T88 793 aaPredicted RBP28.27■■■□□ 2.12
VEGFA-226ENST00000611736 XPOTO43592 962 aaKnown RBP28.26■■■□□ 2.11
VEGFA-226ENST00000611736 MYL1P05976 194 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 ADH1AP07327 375 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 RPL17P18621 184 aaKnown RBP28.26■■■□□ 2.11
VEGFA-226ENST00000611736 TMEM132DQ14C87 1099 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 ZBTB6Q15916 424 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-226ENST00000611736 GLYCTKQ8IVS8 523 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 SMRP1Q8NCR6 262 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 RXFP1Q9HBX9 757 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 CHMP5Q9NZZ3 219 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 FAM50BQ9Y247 325 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 NUB1Q9Y5A7 615 aa28.26■■■□□ 2.11
VEGFA-226ENST00000611736 TRAPPC3O43617 180 aa28.25■■■□□ 2.11
VEGFA-226ENST00000611736 CLCN4P51793 760 aa28.25■■■□□ 2.11
VEGFA-226ENST00000611736 SYCE2Q6PIF2 218 aa28.25■■■□□ 2.11
VEGFA-226ENST00000611736 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.25■■■□□ 2.11
VEGFA-226ENST00000611736 MUC3AQ02505 3323 aa28.25■■■□□ 2.11
VEGFA-226ENST00000611736 PLXNA3P51805 1871 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 TNFRSF10AO00220 468 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 RPN1P04843 607 aaKnown RBP28.24■■■□□ 2.11
VEGFA-226ENST00000611736 CYP3A5P20815 502 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 TKTP29401 623 aaKnown RBP28.24■■■□□ 2.11
VEGFA-226ENST00000611736 LRPAP1P30533 357 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 STK4Q13043 487 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 PSMD5Q16401 504 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 GPR65Q8IYL9 337 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 BEST2Q8NFU1 509 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 PIK3R5Q8WYR1 880 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 TSPAN18Q96SJ8 248 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 ASB7Q9H672 318 aa28.24■■■□□ 2.11
VEGFA-226ENST00000611736 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.24■■■□□ 2.11
VEGFA-226ENST00000611736 EXTL3O43909 919 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 LDHAP00338 332 aaKnown RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 HOXB8P17481 243 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 FGFR3P22607 806 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 MCM4P33991 863 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 POU5F1Q01860 360 aaKnown RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 CREMQ03060 361 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 DPYDQ12882 1025 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 SPATA1Q5VX52 437 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 BRSK2Q8IWQ3 736 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 FMR1NBQ8N0W7 255 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 KIAA0895Q8NCT3 520 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 LNX1Q8TBB1 728 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 FBXL18Q96ME1 805 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 DZANK1Q9NVP4 752 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 RBAKQ9NYW8 714 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 FNIP2Q9P278 1114 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 DERAQ9Y315 318 aa28.23■■■□□ 2.11
VEGFA-226ENST00000611736 USP15Q9Y4E8 981 aaPredicted RBP28.23■■■□□ 2.11
VEGFA-226ENST00000611736 TGFB1I1O43294 461 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 IL18RAPO95256 599 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 GLUD1P00367 558 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 PSMD2Q13200 908 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 SMAD2Q15796 467 aaKnown RBP28.22■■■□□ 2.11
VEGFA-226ENST00000611736 BMT2Q1RMZ1 405 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 PALB2Q86YC2 1186 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 GPD1LQ8N335 351 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 C12orf76Q8N812 135 aaPredicted RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms