RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 N4BP3O15049 544 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 MOSPD3O75425 235 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 SEC24AO95486 1093 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 PRKCBP05771 671 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 GSE1Q14687 1217 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 LPAL2Q16609 132 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 UPP1Q16831 310 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
FDPS-220ENST00000611010 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
FDPS-220ENST00000611010 CHRDQ9H2X0 955 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 AVENQ9NQS1 362 aaPredicted RBP12.99□□□□□ -0.33
FDPS-220ENST00000611010 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
FDPS-220ENST00000611010 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
FDPS-220ENST00000611010 MYH11P35749 1972 aa12.99□□□□□ -0.33
FDPS-220ENST00000611010 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 MYO16Q9Y6X6 1858 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ARNTLO00327 626 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 MARCH6O60337 910 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 TBC1D4O60343 1298 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 NEMFO60524 1076 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 B3GAT3O94766 335 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ABLIM3O94929 683 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 KRT2P35908 639 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 TXKP42681 527 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 DMWDQ09019 674 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ELAVL2Q12926 359 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 PRPF4BQ13523 1007 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 FAM78AQ5JUQ0 283 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 NT5DC1Q5TFE4 455 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 SLC8B1Q6J4K2 584 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 VITQ6UXI7 678 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ATRIPQ8WXE1 791 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 DNASE1L2Q92874 299 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ELSPBP1Q96BH3 223 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 ZSWIM3Q96MP5 696 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 GDE1Q9NZC3 331 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
FDPS-220ENST00000611010 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
FDPS-220ENST00000611010 CHD6Q8TD26 2715 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 BTBD18B2RXH4 712 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ACKR2O00590 384 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 CDKL5O76039 1030 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ADRB1P08588 477 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 LIG1P18858 919 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 FOSBP53539 338 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 LMNB2Q03252 620 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 SPEM2Q0P670 501 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ECM1Q16610 540 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
FDPS-220ENST00000611010 PDXDC1Q6P996 788 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ZNF852Q6ZMS4 543 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ZBTB8OSQ8IWT0 167 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 MCPH1Q8NEM0 835 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 RSPRY1Q96DX4 576 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
FDPS-220ENST00000611010 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
FDPS-220ENST00000611010 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
FDPS-220ENST00000611010 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 C2orf42Q9NWW7 574 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 FRYQ5TBA9 3013 aa12.97□□□□□ -0.33
FDPS-220ENST00000611010 ABLIM1O14639 778 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 VNN2O95498 520 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
FDPS-220ENST00000611010 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 NAMPTP43490 491 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 SATB1Q01826 763 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 SRSF5Q13243 272 aaKnown RBP12.96□□□□□ -0.33
FDPS-220ENST00000611010 CUL4AQ13619 759 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 MAPK6Q16659 721 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 TAS1R3Q7RTX0 852 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 NECAB1Q8N987 351 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 BORCS6Q96GS4 357 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 RTKNQ9BST9 563 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 CDT1Q9H211 546 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 INSL5Q9Y5Q6 135 aa12.96□□□□□ -0.33
FDPS-220ENST00000611010 ASPMQ8IZT6 3477 aa12.96□□□□□ -0.34
FDPS-220ENST00000611010 WDFY3Q8IZQ1 3526 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 PRR5-ARHGAP8B1AHC4 643 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 JAK2O60674 1132 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 GJA1P17302 382 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 XBP1P17861 261 aa12.95□□□□□ -0.34
FDPS-220ENST00000611010 CYP11B2P19099 503 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms