RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ANKLE1Q8NAG6 615 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 PARD3BQ8TEW8 1205 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 P3H4Q92791 437 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 TRIM6Q9C030 488 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.69■■□□□ 1.063e-6■■■□□ 18.1
SSBP3-216ENST00000610401 MROH7Q68CQ1 1323 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 C2orf71A6NGG8 1288 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 EPHB2P29323 1055 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 RPA3P35244 121 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 BNIP1Q12981 228 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 MTMR1Q13613 665 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 VPS72Q15906 364 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 TLDC1Q6P9B6 456 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 BZW1Q7L1Q6 419 aaKnown RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 BSNDQ8WZ55 320 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 MXRA8Q9BRK3 442 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 NPHS2Q9NP85 383 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 P4HBP07237 508 aaKnown RBP21.68■■□□□ 1.06
SSBP3-216ENST00000610401 TAC1P20366 129 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 IVDP26440 423 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 QARSP47897 775 aaKnown RBP21.68■■□□□ 1.06
SSBP3-216ENST00000610401 GPS1Q13098 491 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 SLC15A2Q16348 729 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 SHC3Q92529 594 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 ZNF668Q96K58 619 aaPredicted RBP21.68■■□□□ 1.06
SSBP3-216ENST00000610401 SERPINB12Q96P63 405 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 PLVAPQ9BX97 442 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 KMT5AQ9NQR1 393 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 DNPEPQ9ULA0 475 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 ENTPD5O75356 428 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 ITIH2P19823 946 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 MAGEA4P43358 317 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 WNT7BP56706 349 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 RPL7AP62424 266 aaKnown RBP21.68■■□□□ 1.06
SSBP3-216ENST00000610401 SMTNL2Q2TAL5 461 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 PCNX4Q63HM2 1172 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 MIS18BP1Q6P0N0 1132 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 GMCL1P1Q8NEA9 526 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 TTC8Q8TAM2 541 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 KIFAP3Q92845 792 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 LRRC19Q9H756 370 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 ANKFY1Q9P2R3 1169 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 KAT6AQ92794 2004 aa21.68■■□□□ 1.06
SSBP3-216ENST00000610401 VIL1P09327 827 aaKnown RBP21.67■■□□□ 1.06
SSBP3-216ENST00000610401 NPTX2P47972 431 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ANKRD20A2Q5SQ80 823 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 TMEM63BQ5T3F8 832 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ANKRD20A1Q5TYW2 823 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ANKRD20A3Q5VUR7 823 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 BTNL9Q6UXG8 535 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ARHGEF18Q6ZSZ5 1173 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 TAAR1Q96RJ0 339 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 KIAA1683Q9H0B3 1180 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 METTL5Q9NRN9 209 aaKnown RBP21.67■■□□□ 1.06
SSBP3-216ENST00000610401 PHTF1Q9UMS5 762 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
SSBP3-216ENST00000610401 NHSQ6T4R5 1651 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 CYP1A2P05177 515 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ATP2A2P16615 1042 aaKnown RBP21.67■■□□□ 1.06
SSBP3-216ENST00000610401 DACT2Q5SW24 774 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 TMEM121Q9BTD3 319 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 OSBPL8Q9BZF1 889 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 GRID1Q9ULK0 1009 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 SUGT1Q9Y2Z0 365 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
SSBP3-216ENST00000610401 CFAP73A6NFT4 308 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 ATL2Q8NHH9 583 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 CEP170P1Q96L14 293 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 IFT74Q96LB3 600 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 TRAIPQ9BWF2 469 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 RXFP1Q9HBX9 757 aa21.67■■□□□ 1.06
SSBP3-216ENST00000610401 GSTA1P08263 222 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 DSG3P32926 999 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 ARSEP51690 589 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 CCNHP51946 323 aaPredicted RBP21.66■■□□□ 1.06
SSBP3-216ENST00000610401 ZNF268Q14587 947 aaPredicted RBP21.66■■□□□ 1.06
SSBP3-216ENST00000610401 SMAD1Q15797 465 aaKnown RBP21.66■■□□□ 1.06
SSBP3-216ENST00000610401 TXNRD3NBQ6F5E7 133 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 UTP4Q969X6 686 aaKnown RBP21.66■■□□□ 1.06
SSBP3-216ENST00000610401 FSCN2O14926 492 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 C21orf2O43822 256 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 RAD23BP54727 409 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 SETDB1Q15047 1291 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 MCOLN2Q8IZK6 566 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 FBF1Q8TES7 1133 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 ZBTB45Q96K62 511 aaPredicted RBP21.66■■□□□ 1.06
SSBP3-216ENST00000610401 UBN1Q9NPG3 1134 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 TBX20Q9UMR3 447 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 NEU2Q9Y3R4 380 aa21.66■■□□□ 1.06
SSBP3-216ENST00000610401 A0A0G2JND7 137 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 GZMAP12544 262 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 PCK1P35558 622 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 IL9RQ01113 521 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 SEPT7Q16181 437 aaKnown RBP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 KCNT1Q5JUK3 1230 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 LRRN4Q8WUT4 740 aa21.65■■□□□ 1.06
SSBP3-216ENST00000610401 L3MBTL3Q96JM7 780 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-216ENST00000610401 LRRC37BQ96QE4 947 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms