RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 CLCNKBP51801 687 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 ROR1Q01973 937 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 SIM2Q14190 667 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-214ENST00000607020 MRPL58Q14197 206 aaKnown RBP16.5■□□□□ 0.23
SSBP4-214ENST00000607020 GRM2Q14416 872 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 LPAL2Q16609 132 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 DCAF4L1Q3SXM0 396 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 C1orf228Q6PIY5 440 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 TCEAL4Q96EI5 215 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 CORO1BQ9BR76 489 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-214ENST00000607020 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 USP24Q9UPU5 2620 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 CACNA1GO43497 2377 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 DOCK6Q96HP0 2047 aa16.5■□□□□ 0.23
SSBP4-214ENST00000607020 CFAP47Q6ZTR5 3102 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 ARNTLO00327 626 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
SSBP4-214ENST00000607020 REC8O95072 547 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 PRKCBP05771 671 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 SPATA31C1P0DKV0 1188 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 CCR2P41597 374 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 SATB1Q01826 763 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 GAS6Q14393 721 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 CALCRLQ16602 461 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 TPGS2Q68CL5 300 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 VITQ6UXI7 678 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 LEMD2Q8NC56 503 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 C3orf58Q8NDZ4 430 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 CHAMP1Q96JM3 812 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 GJB4Q9NTQ9 266 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
SSBP4-214ENST00000607020 A0A087WWV3 80 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 SMIM28A0A1B0GU29 152 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 PRRG1O14668 218 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 SYN3O14994 580 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 MOSPD3O75425 235 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 CYP11B2P19099 503 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 GDI1P31150 447 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 NAMPTP43490 491 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 LIMK1P53667 647 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 EPHA5P54756 1037 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 SHC2P98077 582 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 STK3Q13188 491 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 PTGDRQ13258 359 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 CYP4A22Q5TCH4 519 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 PRR23BQ6ZRT6 265 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
SSBP4-214ENST00000607020 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 LONP2Q86WA8 852 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 MFSD6LQ8IWD5 586 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 BSNDQ8WZ55 320 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 E2F7Q96AV8 911 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 ZSWIM3Q96MP5 696 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 LARP6Q9BRS8 491 aaKnown RBP16.48■□□□□ 0.23
SSBP4-214ENST00000607020 TUFT1Q9NNX1 390 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 INSL5Q9Y5Q6 135 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 MYH15Q9Y2K3 1946 aa16.48■□□□□ 0.23
SSBP4-214ENST00000607020 MIA3Q5JRA6 1907 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 NOTCH4Q99466 2003 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 FAM205CA6NFA0 338 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 H7C4K7 107 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 K7ESF4 209 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 TM4SF5O14894 197 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 ZNF263O14978 683 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 SEC24AO95486 1093 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 PMLP29590 882 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 TXKP42681 527 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 BRCC3P46736 316 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 EFNA5P52803 228 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 SCRN1Q12765 414 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 TMEM132AQ24JP5 1023 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 GPR88Q9GZN0 384 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 CYP4F11Q9HBI6 524 aa16.47■□□□□ 0.23
SSBP4-214ENST00000607020 CHURC1-FNTBB4DL54 471 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 I3L4J1 428 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 GDF9O60383 454 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 EDN1P05305 212 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 CCNE1P24864 410 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 VIPR2P41587 438 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 FNTBP49356 437 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 NR5A1Q13285 461 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 LRRC32Q14392 662 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 PPP2R5AQ15172 486 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 GLRA4Q5JXX5 417 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 NT5DC1Q5TFE4 455 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-214ENST00000607020 ELMOD1Q8N336 334 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 DEPTORQ8TB45 409 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 ZNF512Q96ME7 567 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms