RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 H0YCG3 227 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ADAM12O43184 909 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 LAMP2P13473 410 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 SCP2P22307 547 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 RPL9P32969 192 aaKnown RBP14.59□□□□□ -0.07
CTSA-213ENST00000606782 UBA7P41226 1012 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 NCKAP1LP55160 1127 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 MCL1Q07820 350 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
CTSA-213ENST00000606782 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 C3orf58Q8NDZ4 430 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ZBTB45Q96K62 511 aaPredicted RBP14.59□□□□□ -0.07
CTSA-213ENST00000606782 MYADMQ96S97 322 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 BLOC1S4Q9NUP1 217 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ODF2LQ9ULJ1 636 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
CTSA-213ENST00000606782 CITO14578 2027 aa14.59□□□□□ -0.07
CTSA-213ENST00000606782 ANHXE9PGG2 379 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 MYBP10242 640 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 CMA1P23946 247 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 OR1D2P34982 312 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 CLCN5P51795 746 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 ZNF131P52739 623 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 OSTNP61366 133 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 RAD51AP2Q09MP3 1159 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 STRN3Q13033 797 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 SLC10A6Q3KNW5 377 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 RESP18Q5W5W9 173 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 RSPO2Q6UXX9 243 aaPredicted RBP14.58□□□□□ -0.08
CTSA-213ENST00000606782 ANKS3Q6ZW76 656 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 ALYREFQ86V81 257 aaKnown RBP14.58□□□□□ -0.08
CTSA-213ENST00000606782 LRRC15Q8TF66 581 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 CDK5RAP3Q96JB5 506 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 PLIN2Q99541 437 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 IRF2BPLQ9H1B7 796 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 PIDD1Q9HB75 910 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 GOLGA2P5Q9HBQ8 144 aa14.58□□□□□ -0.08
CTSA-213ENST00000606782 FAM237AA0A1B0GTK4 181 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 A0A1W2PQ27 194 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 A0A1W2PQ64 194 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 A0A1W2PQD8 194 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 SYN3O14994 580 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 TBC1D4O60343 1298 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 PIGRP01833 764 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 TKTP29401 623 aaKnown RBP14.57□□□□□ -0.08
CTSA-213ENST00000606782 GBP2P32456 591 aaPredicted RBP14.57□□□□□ -0.08
CTSA-213ENST00000606782 MRE11P49959 708 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 MRPL58Q14197 206 aaKnown RBP14.57□□□□□ -0.08
CTSA-213ENST00000606782 NOLC1Q14978 699 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTSA-213ENST00000606782 LIN9Q5TKA1 542 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
CTSA-213ENST00000606782 SLC8B1Q6J4K2 584 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 SLC44A3Q8N4M1 653 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 CALML4Q96GE6 196 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 PLEKHA5Q9HAU0 1116 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
CTSA-213ENST00000606782 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
CTSA-213ENST00000606782 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 PODXLO00592 558 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 CLDN3O15551 220 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
CTSA-213ENST00000606782 ABLIM3O94929 683 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 C8AP07357 584 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 ADRB2P07550 413 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 CLTAP09496 248 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 NPR3P17342 541 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 BRCC3P46736 316 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 ZBTB6Q15916 424 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 PPM1LQ5SGD2 360 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 TMEM105Q8N8V8 129 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 ZNF461Q8TAF7 563 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 RAD54LQ92698 747 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 SUSD3Q96L08 255 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 TSPAN18Q96SJ8 248 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 FIZ1Q96SL8 496 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 REEP2Q9BRK0 252 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 HAPLN2Q9GZV7 340 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 CCDC39Q9UFE4 941 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 NOTCH4Q99466 2003 aa14.56□□□□□ -0.08
CTSA-213ENST00000606782 ZFHX2Q9C0A1 2572 aaPredicted RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 TTC26A0AVF1 554 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 ARHGEF37A1IGU5 675 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 I3L4J1 428 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 FAM189A1O60320 539 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 XYLBO75191 536 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 PLCG1P19174 1290 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 FSHRP23945 695 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 HTR4Q13639 388 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 KARSQ15046 597 aaKnown RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 KYAT1Q16773 422 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 VARS2Q5ST30 1063 aaKnown RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 CWF19L1Q69YN2 538 aaKnown RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 GRASPQ7Z6J2 395 aaPredicted RBP14.55□□□□□ -0.08
CTSA-213ENST00000606782 GPBP1Q86WP2 473 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 RSAD2Q8WXG1 361 aa14.55□□□□□ -0.08
CTSA-213ENST00000606782 C18orf25Q96B23 403 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms