RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PLBD2Q8NHP8 589 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 RTF1Q92541 710 aaKnown RBP4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 BORCS6Q96GS4 357 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 RSRC1Q96IZ7 334 aaKnown RBP4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 KCNJ15Q99712 375 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 G6PC3Q9BUM1 346 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 ANO3Q9BYT9 981 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 SEMA4AQ9H3S1 761 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 PRKRIP1Q9H875 184 aaPredicted RBP4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 VPS45Q9NRW7 570 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 BTG4Q9NY30 223 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 MSRAQ9UJ68 235 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 FBXO10Q9UK96 956 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 KCTD3Q9Y597 815 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 NUB1Q9Y5A7 615 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 IQGAP3Q86VI3 1631 aa4.53□□□□□ -1.68
IGHV3-29-201ENST00000604817 A0A1W2PQ27 194 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 A0A1W2PQ64 194 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 A0A1W2PQC6 194 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 A0A1W2PQD8 194 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 BICDL2A1A5D9 508 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 POM121BA6NF01 834 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CCDC154A6NI56 674 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 HRKO00198 91 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 HTRA2O43464 458 aaPredicted RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 FRS3O43559 492 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SASH1O94885 1247 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CYP17A1P05093 508 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CLEC2LP0C7M8 214 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CKMT1AP12532 417 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 RPL17P18621 184 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 KRT15P19012 456 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CALRP27797 417 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ELF1P32519 619 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 HSPA7P48741 367 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 RTP1P59025 263 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SPIRE1Q08AE8 756 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 STARD3Q14849 445 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 TAF5Q15542 800 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 MPEG1Q2M385 716 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 GALNT18Q6P9A2 607 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 FASTKD5Q7L8L6 764 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 DAAM2Q86T65 1068 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SLCO6A1Q86UG4 719 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CPNE8Q86YQ8 564 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 RIOX2Q8IUF8 465 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ZZZ3Q8IYH5 903 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 TMEM52Q8NDY8 209 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 KLHDC4Q8TBB5 520 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ADAMTS18Q8TE60 1221 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SH3RF2Q8TEC5 729 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 NUP133Q8WUM0 1156 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ASB12Q8WXK4 309 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 HHIPL1Q96JK4 782 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 CHAMP1Q96JM3 812 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ZC3H10Q96K80 434 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 NT5C1BQ96P26 610 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 RMDN3Q96TC7 470 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 BARD1Q99728 777 aaKnown RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 MAGEH1Q9H213 219 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 PCIF1Q9H4Z3 704 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 PLEKHA5Q9HAU0 1116 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 UBN1Q9NPG3 1134 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 WASH6PQ9NQA3 447 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 ANKEF1Q9NU02 776 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 MAGED2Q9UNF1 606 aaPredicted RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 COA3Q9Y2R0 106 aaPredicted RBP4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 SNX13Q9Y5W8 968 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 B3GALT1Q9Y5Z6 326 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 TAF6LQ9Y6J9 622 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 X6R8D5 127 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 NUP155O75694 1391 aa4.52□□□□□ -1.69
IGHV3-29-201ENST00000604817 USP19O94966 1318 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 CEP350Q5VT06 3117 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 USP32Q8NFA0 1604 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 FOXN3O00409 490 aaPredicted RBP4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 KRIT1O00522 736 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 MAN2B1O00754 1011 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 PLOD3O60568 738 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 DGKIO75912 1065 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 POLBP06746 335 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 TGFB3P10600 412 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 HARSP12081 509 aaKnown RBP4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 MTHFD2P13995 350 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 RPS6KB1P23443 525 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 CNTFP26441 200 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 HOXD12P35452 270 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 BCL6P41182 706 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 IL12RB1P42701 662 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 ALDH9A1P49189 494 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 TUBP50607 506 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 SLC5A3P53794 718 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 SLC16A1P53985 500 aa4.51□□□□□ -1.69
IGHV3-29-201ENST00000604817 DSC2Q02487 901 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms