RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TPI1P60174 286 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 LONRF1Q17RB8 773 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 COBLL1Q53SF7 1204 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 DIABLOQ9NR28 239 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 RBAKQ9NYW8 714 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 PCDHA6Q9UN73 950 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 PCDHA8Q9Y5H6 950 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 KDM6BO15054 1643 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 SESN2P58004 480 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 DCAF4L1Q3SXM0 396 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 LCP1P13796 627 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 IYDQ6PHW0 289 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 OLFML3Q9NRN5 406 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 TBC1D22BQ9NU19 505 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 CAND2O75155 1236 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 AGBL2Q5U5Z8 902 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 MTHFD1LQ6UB35 978 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 GUF1Q8N442 669 aaKnown RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM51Q9BSJ1 452 aa10.09□□□□□ -0.79
CSMD1-217ENST00000602723 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
CSMD1-217ENST00000602723 ATP6V1B1P15313 513 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 STAT3P40763 770 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 CDK17Q00537 523 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 MTF1Q14872 753 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 DCUN1D1Q96GG9 259 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 FEM1BQ9UK73 627 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 NMT2O60551 498 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 GNAT1P11488 350 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SFNP31947 248 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 DUOXA2Q1HG44 320 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ATPAF2Q8N5M1 289 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ASAP3Q8TDY4 903 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PDP2Q9P2J9 529 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SPATA31E1Q6ZUB1 1445 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 NFIBO00712 420 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 KRT76Q01546 638 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 WASHC5Q12768 1159 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PTK7Q13308 1070 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 GRM4Q14833 912 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 UGP2Q16851 508 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ARHGEF38Q9NXL2 777 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 RP1P56715 2156 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 UBTFL6P0CB48 400 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 TTC23LQ6PF05 361 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SIK2Q9H0K1 926 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 RAB14P61106 215 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SYCP2LQ5T4T6 812 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PKN3Q6P5Z2 889 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ASNSP08243 561 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SLC9A5Q14940 896 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 VIRMAQ69YN4 1812 aaKnown RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 CYP2D6P10635 497 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 NNMTP40261 264 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM69Q86WT6 500 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SLC35G2Q8TBE7 412 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 TRIM8Q9BZR9 551 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 FCER1AP12319 257 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PSMA4P25789 261 aaKnown RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SGSM3Q96HU1 749 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ERVV-1B6SEH8 477 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 AP3B1O00203 1094 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 TOMM70O94826 608 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ZNF200P98182 395 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ACCSLQ4AC99 568 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 IL1RL2Q9HB29 575 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 BARHL2Q9NY43 387 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
CSMD1-217ENST00000602723 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 ANGPT1Q15389 498 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 IFNEQ86WN2 208 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 CNBD2Q96M20 576 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 C2orf40Q9H1Z8 148 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 AP4S1Q9Y587 144 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 NRKQ7Z2Y5 1582 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
CSMD1-217ENST00000602723 HSPA13P48723 471 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 TTC33Q6PID6 262 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-217ENST00000602723 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
CSMD1-217ENST00000602723 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 SENP7Q9BQF6 1050 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 SPON2Q9BUD6 331 aa10.07□□□□□ -0.8
CSMD1-217ENST00000602723 BBS2Q9BXC9 721 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms