RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 IGBP1P78318 339 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 SNX30Q5VWJ9 437 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 SCG3Q8WXD2 468 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 ANKRD27Q96NW4 1050 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 MXRA8Q9BRK3 442 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 SEPT11Q9NVA2 429 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
PPFIA3-206ENST00000602655 GSTA2P09210 222 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 IREB2P48200 963 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 BPIFB4P59827 614 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 PDCD2LQ9BRP1 358 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 STK17AQ9UEE5 414 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TBK1Q9UHD2 729 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 POLR2AP24928 1970 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 PEX11AO75192 247 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 PEX3P56589 373 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 SGSM1Q2NKQ1 1148 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 FAM13CQ8NE31 585 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 NMD3Q96D46 503 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TRAPPC9Q96Q05 1148 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TTYH3Q9C0H2 523 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 STMN4Q9H169 189 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 LRCH1Q9Y2L9 728 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 SNCAIPQ9Y6H5 919 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 ACTN1P12814 892 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 NT5C2P49902 561 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 RCN1Q15293 331 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 Q3C1V9 767 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 SH2D4BQ5SQS7 431 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 DNAJC19Q96DA6 116 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
PPFIA3-206ENST00000602655 SPDYE16A6NNV3 312 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 FOXO6A8MYZ6 492 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 K7ENM7 598 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 SERPINB3P29508 390 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 RASSF2P50749 326 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 SFSWAPQ12872 951 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 PGM5Q15124 567 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 HAUS1Q96CS2 278 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 PITPNM3Q9BZ71 974 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 SEPT9Q9UHD8 586 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TMEM120BA0PK00 339 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 SLC16A4O15374 487 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 CSDE1O75534 798 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 FUT4P22083 530 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 RPA1P27694 616 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 ECHS1P30084 290 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 VHLP40337 213 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 MMP13P45452 471 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 ATL2Q8NHH9 583 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 GLG1Q92896 1179 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 MAGEA13PA6NCF6 341 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 ABLIM1O14639 778 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TMCC1O94876 653 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TRIM49P0CI25 452 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TRIM49CP0CI26 452 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 ACADSP16219 412 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 GIT2Q14161 759 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 MEI1Q5TIA1 1274 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 OR52E8Q6IFG1 317 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 TLCD1Q96CP7 247 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 FAM20AQ96MK3 541 aa16.31■□□□□ 0.2
PPFIA3-206ENST00000602655 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 UNC5CO95185 931 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 FGGP02679 453 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 LRRC37BQ96QE4 947 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 SEMA4AQ9H3S1 761 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 PHF24Q9UPV7 400 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 KDM3AQ9Y4C1 1321 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 MYH15Q9Y2K3 1946 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 CAPN9O14815 690 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
PPFIA3-206ENST00000602655 LONRF1Q17RB8 773 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms