RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
SMG9-213ENST00000602222 DNMT3BQ9UBC3 853 aaKnown RBP16.57■□□□□ 0.24
SMG9-213ENST00000602222 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 H0YCG3 227 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 I3L4J1 428 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMG9-213ENST00000602222 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
SMG9-213ENST00000602222 ARSHQ5FYA8 562 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
SMG9-213ENST00000602222 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 FGF14Q92915 247 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 C18orf25Q96B23 403 aaPredicted RBP16.56■□□□□ 0.24
SMG9-213ENST00000602222 SUSD3Q96L08 255 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 RPP25Q9BUL9 199 aaKnown RBP16.56■□□□□ 0.24
SMG9-213ENST00000602222 TBC1D17Q9HA65 648 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 ARHGEF3Q9NR81 526 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 LARSQ9P2J5 1176 aaKnown RBP16.56■□□□□ 0.24
SMG9-213ENST00000602222 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 POLIQ9UNA4 740 aa16.56■□□□□ 0.24
SMG9-213ENST00000602222 H7C4K7 107 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 ATF2P15336 505 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 SCP2P22307 547 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 STARD6P59095 220 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 ROR1Q01973 937 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 RAD51AP2Q09MP3 1159 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 PABPC1LQ4VXU2 614 aaKnown RBP16.55■□□□□ 0.24
SMG9-213ENST00000602222 ASCL5Q7RTU5 278 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 TCEAL8Q8IYN2 117 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 CDK5RAP3Q96JB5 506 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 PLIN2Q99541 437 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 ODF2LQ9ULJ1 636 aa16.55■□□□□ 0.24
SMG9-213ENST00000602222 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.55■□□□□ 0.24
SMG9-213ENST00000602222 GVINP1Q7Z2Y8 2422 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 WDR27A2RRH5 827 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 PRR23AA6NEV1 266 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 STK25O00506 426 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 CLDN3O15551 220 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 BMP15O95972 392 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 CLTAP09496 248 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 HARSP12081 509 aaKnown RBP16.54■□□□□ 0.24
SMG9-213ENST00000602222 GPC5P78333 572 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 TPGS2Q68CL5 300 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 HAPLN2Q9GZV7 340 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
SMG9-213ENST00000602222 GDE1Q9NZC3 331 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 DLGAP2Q9P1A6 1054 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 FBXL5Q9UKA1 691 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 MAFFQ9ULX9 164 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
SMG9-213ENST00000602222 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
SMG9-213ENST00000602222 MYO15AQ9UKN7 3530 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 NPHP3-ACAD11A0A0J9YXS1 232 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 RHOP08100 348 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 PTPN2P17706 415 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 LRPAP1P30533 357 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 ELF1P32519 619 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 ZNF131P52739 623 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 KYAT1Q16773 422 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
SMG9-213ENST00000602222 HAUS6Q7Z4H7 955 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 FRMD5Q7Z6J6 570 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 APPL2Q8NEU8 664 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 ST13P5Q8NFI4 369 aaPredicted RBP16.53■□□□□ 0.24
SMG9-213ENST00000602222 SHDQ96IW2 340 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 MRPS23Q9Y3D9 190 aaKnown RBP16.53■□□□□ 0.24
SMG9-213ENST00000602222 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
SMG9-213ENST00000602222 CITO14578 2027 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 MICAL2O94851 1124 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 PIGRP01833 764 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 ADRB2P07550 413 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 CYP3A5P20815 502 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 RFX1P22670 979 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 UBA7P41226 1012 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 SEZ6Q53EL9 994 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 BRAPQ7Z569 592 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 LRRC15Q8TF66 581 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 DDX12PQ92771 950 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 NKD2Q969F2 451 aaPredicted RBP16.52■□□□□ 0.24
SMG9-213ENST00000602222 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 TBC1D32Q96NH3 1257 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 TSPAN18Q96SJ8 248 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
SMG9-213ENST00000602222 BLOC1S4Q9NUP1 217 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
SMG9-213ENST00000602222 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
SMG9-213ENST00000602222 EP300Q09472 2414 aaPredicted RBP16.51■□□□□ 0.23
SMG9-213ENST00000602222 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
SMG9-213ENST00000602222 DMDP11532 3685 aa16.51■□□□□ 0.23
SMG9-213ENST00000602222 M0QZQ0 153 aa16.51■□□□□ 0.23
SMG9-213ENST00000602222 PRRG1O14668 218 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms