RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ERVK-5Q9HDB9 667 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 PADI3Q9ULW8 664 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 HES2Q9Y543 173 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 IPPQ9Y573 584 aa19.37■□□□□ 0.69
VRK3-225ENST00000601912 USP27XA6NNY8 438 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 FOXN3O00409 490 aaPredicted RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 RECQL4O94761 1208 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 CST3P01034 146 aaPredicted RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 TBXAS1P24557 533 aaPredicted RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 CD52P31358 61 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 KIF11P52732 1056 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 NOP14P78316 857 aaKnown RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 BFSP2Q13515 415 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 LPIN1Q14693 890 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 VPS36Q86VN1 386 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 ARMC5Q96C12 935 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 KIF12Q96FN5 646 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 PPP1R13BQ96KQ4 1090 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 KREMEN1Q96MU8 473 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 HAUS4Q9H6D7 363 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 PARP2Q9UGN5 583 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 ANK1P16157 1881 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 CITO14578 2027 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 EVI5O60447 810 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 ASS1P00966 412 aaKnown RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 KRT19P08727 400 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 ANXA13P27216 316 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 FAM126BQ8IXS8 530 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 SHC3Q92529 594 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 TAF4BQ92750 862 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 KAT5Q92993 513 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 JAKMIP2Q96AA8 810 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 RRAGDQ9NQL2 400 aaPredicted RBP19.36■□□□□ 0.69
VRK3-225ENST00000601912 FAM105AQ9NUU6 356 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 PCDHB2Q9Y5E7 798 aa19.36■□□□□ 0.69
VRK3-225ENST00000601912 TLR3O15455 904 aaKnown RBP19.35■□□□□ 0.69
VRK3-225ENST00000601912 PNMA6AP0CW24 399 aaPredicted RBP19.35■□□□□ 0.69
VRK3-225ENST00000601912 AKAP5P24588 427 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 USP8P40818 1118 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 MYL6P60660 151 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 ALKAL1Q6UXT8 129 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 C1orf127Q8N9H9 656 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 SMG8Q8ND04 991 aaKnown RBP19.35■□□□□ 0.69
VRK3-225ENST00000601912 ACRBPQ8NEB7 543 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.35■□□□□ 0.69
VRK3-225ENST00000601912 CNTN3Q9P232 1028 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 ITGA11Q9UKX5 1188 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 DNAH12Q6ZR08 3092 aa19.35■□□□□ 0.69
VRK3-225ENST00000601912 HSPA1AP0DMV8 641 aaKnown RBP19.34■□□□□ 0.69
VRK3-225ENST00000601912 HSPA1BP0DMV9 641 aaKnown RBP19.34■□□□□ 0.69
VRK3-225ENST00000601912 RAB27AP51159 221 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 PTK2Q05397 1052 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 CUL2Q13617 745 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 ASTE1Q2TB18 679 aaPredicted RBP19.34■□□□□ 0.69
VRK3-225ENST00000601912 ZNF699Q32M78 642 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 SPOPLQ6IQ16 392 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 FAM71AQ8IYT1 594 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 APOBEC3GQ9HC16 384 aaKnown RBP19.34■□□□□ 0.69
VRK3-225ENST00000601912 DPP3Q9NY33 737 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
VRK3-225ENST00000601912 XPOTO43592 962 aaKnown RBP19.33■□□□□ 0.69
VRK3-225ENST00000601912 CD4P01730 458 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 ITGB3P05106 788 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 SELPP16109 830 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 ATICP31939 592 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 REXO1L1PQ8IX06 675 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 BEST2Q8NFU1 509 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 ELMO3Q96BJ8 720 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 TRAIPQ9BWF2 469 aa19.33■□□□□ 0.69
VRK3-225ENST00000601912 LUC7LQ9NQ29 371 aaKnown RBP19.33■□□□□ 0.69
VRK3-225ENST00000601912 LCA5LO95447 670 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 ITGA4P13612 1032 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 RBP5P82980 135 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 PTPN14Q15678 1187 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 SLC18A3Q16572 532 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 SLC39A5Q6ZMH5 540 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 LRRC8DQ7L1W4 858 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 ZNF571Q7Z3V5 609 aaPredicted RBP19.33■□□□□ 0.68
VRK3-225ENST00000601912 KIAA1328Q86T90 577 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 TXLNBQ8N3L3 684 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 FAXDC2Q96IV6 333 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 NIF3L1Q9GZT8 377 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 ADAMTS1Q9UHI8 967 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 SIX4Q9UIU6 781 aa19.33■□□□□ 0.68
VRK3-225ENST00000601912 UBQLN1Q9UMX0 589 aaKnown RBP19.33■□□□□ 0.68
VRK3-225ENST00000601912 PQBP1O60828 265 aaKnown RBP19.32■□□□□ 0.68
VRK3-225ENST00000601912 SKIP12755 728 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 KRT5P13647 590 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 KCNE1P15382 129 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 ATN1P54259 1190 aaPredicted RBP19.32■□□□□ 0.68
VRK3-225ENST00000601912 GFPT1Q06210 699 aaPredicted RBP19.32■□□□□ 0.68
VRK3-225ENST00000601912 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 XKR4Q5GH76 650 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 TRAF7Q6Q0C0 670 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 ZMAT2Q96NC0 199 aaKnown RBP19.32■□□□□ 0.68
VRK3-225ENST00000601912 OSBPL7Q9BZF2 842 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 XYLT2Q9H1B5 865 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
VRK3-225ENST00000601912 RALGAPA2Q2PPJ7 1873 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms