RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 SIX2Q9NPC8 291 aa23.8■■□□□ 1.4
SNRNP70-209ENST00000601065 PLCB1Q9NQ66 1216 aa23.8■■□□□ 1.4
SNRNP70-209ENST00000601065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
SNRNP70-209ENST00000601065 AKR1B15C9JRZ8 316 aaPredicted RBP23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 PHACTR2O75167 634 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 NOL4O94818 638 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 HLA-DRAP01903 254 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 PIK3CAP42336 1068 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 AFF1P51825 1210 aaKnown RBP23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 IKBKEQ14164 716 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 FIGNQ5HY92 759 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 SCARA3Q6AZY7 606 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 TC2NQ8N9U0 490 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 NEK11Q8NG66 645 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 ELAC1Q9H777 363 aaKnown RBP23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 TMEM161AQ9NX61 479 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 TTC3P53804 2025 aa23.79■■□□□ 1.4
SNRNP70-209ENST00000601065 RNF225M0QZC1 329 aaPredicted RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 CST3P01034 146 aaPredicted RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 PFKMP08237 780 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 NCOA4Q13772 614 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 RPUSD2Q8IZ73 545 aaKnown RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 TMEM130Q8N3G9 435 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 CXorf38Q8TB03 319 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 RPS6KC1Q96S38 1066 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 DPP3Q9NY33 737 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 SIX4Q9UIU6 781 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 UBQLN1Q9UMX0 589 aaKnown RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 PLAGL2Q9UPG8 496 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 LTBP2Q14767 1821 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 EVI5O60447 810 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 KLHDC7AQ5VTJ3 777 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 C18orf25Q96B23 403 aaPredicted RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 PPP1R10Q96QC0 940 aaKnown RBP23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 GANQ9H2C0 597 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 TUBGCP4Q9UGJ1 667 aa23.78■■□□□ 1.4
SNRNP70-209ENST00000601065 MFAP3LO75121 409 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 ITGB3P05106 788 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 GUCY2FP51841 1108 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 CNGA4Q8IV77 575 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 CRIPAKQ8N1N5 446 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 BEST2Q8NFU1 509 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 IQCDQ96DY2 449 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 MIOSQ9NXC5 875 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 APEX2Q9UBZ4 518 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 ITGA11Q9UKX5 1188 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 CAPN11Q9UMQ6 739 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 PCDHB7Q9Y5E2 793 aa23.77■■□□□ 1.4
SNRNP70-209ENST00000601065 INPPL1O15357 1258 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 XPOTO43592 962 aaKnown RBP23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 OFD1O75665 1012 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 UCHL3P15374 230 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 SCNN1GP51170 649 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 BADQ92934 168 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 PI4K2AQ9BTU6 479 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 IL23AQ9NPF7 189 aa23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 LUC7L2Q9Y383 392 aaKnown RBP23.76■■□□□ 1.39
SNRNP70-209ENST00000601065 ABHD14A-ACY1A0A1B0GW23 586 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 ZC3H11AO75152 810 aaKnown RBP eCLIP23.75■■□□□ 1.394e-8■□□□□ 11
SNRNP70-209ENST00000601065 THP07101 528 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 KRT19P08727 400 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 ACRP10323 421 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 CYP3A5P20815 502 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 TRPC3Q13507 836 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 CLLU1OSQ5K130 101 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 PHLDB3Q6NSJ2 640 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.75■■□□□ 1.396e-7■■■■■ 40.4
SNRNP70-209ENST00000601065 CEP72Q9P209 647 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 FBXL5Q9UKA1 691 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 A0A1W2PQJ5 194 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 FGFR1P11362 822 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 KRT9P35527 623 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 MYL6P60660 151 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 POLR2FP61218 127 aaKnown RBP23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 SOX4Q06945 474 aaPredicted RBP23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 NAB2Q15742 525 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 GJB7Q6PEY0 223 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 GLB1LQ6UWU2 654 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.75■■□□□ 1.392e-12■■■■■ 28
SNRNP70-209ENST00000601065 TNS4Q8IZW8 715 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 ELMO3Q96BJ8 720 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 SLC38A7Q9NVC3 462 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 FHOD1Q9Y613 1164 aa23.75■■□□□ 1.39
SNRNP70-209ENST00000601065 TDRD15B5MCY1 1934 aaKnown RBP23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 ASS1P00966 412 aaKnown RBP23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 POLR2BP30876 1174 aaKnown RBP23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 PPIGQ13427 754 aaKnown RBP eCLIP23.74■■□□□ 1.393e-15■■□□□ 13.8
SNRNP70-209ENST00000601065 WDR44Q5JSH3 913 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 HELQQ8TDG4 1101 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 NT5C1BQ96P26 610 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 EDEM3Q9BZQ6 932 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 IMPG2Q9BZV3 1241 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 XYLT2Q9H1B5 865 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 LRFN2Q9ULH4 789 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 INPP5FQ9Y2H2 1132 aa23.74■■□□□ 1.39
SNRNP70-209ENST00000601065 POMCP01189 267 aa23.73■■□□□ 1.39
SNRNP70-209ENST00000601065 SYN1P17600 705 aa23.73■■□□□ 1.39
SNRNP70-209ENST00000601065 CCZ1BP86790 482 aa23.73■■□□□ 1.39
SNRNP70-209ENST00000601065 CCZ1P86791 482 aaPredicted RBP23.73■■□□□ 1.39
SNRNP70-209ENST00000601065 FPGSQ05932 587 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms