RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 B3GAT3O94766 335 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 NFICP08651 508 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 GARTP22102 1010 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 FGFR3P22607 806 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 LRPAP1P30533 357 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 BRCC3P46736 316 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 SMAD4Q13485 552 aaKnown RBP17.14■□□□□ 0.33
RPS28-203ENST00000600659 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
RPS28-203ENST00000600659 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 PIK3R5Q8WYR1 880 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 POMGNT1Q8WZA1 660 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 TMEM206Q9H813 350 aa17.14■□□□□ 0.33
RPS28-203ENST00000600659 RPF1Q9H9Y2 349 aaKnown RBP17.14■□□□□ 0.33
RPS28-203ENST00000600659 UBE4BO95155 1302 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 BDP1A6H8Y1 2624 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 I3L4J1 428 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 CYP3A5P20815 502 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 CA8P35219 290 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 DPYDQ12882 1025 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 STK4Q13043 487 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 KMT5BQ4FZB7 885 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 JADE1Q6IE81 842 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 PRSS55Q6UWB4 352 aaPredicted RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 LNX1Q8TBB1 728 aaPredicted RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 SUSD6Q92537 303 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 SAAL1Q96ER3 474 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 TTPALQ9BTX7 342 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
RPS28-203ENST00000600659 UBQLN1Q9UMX0 589 aaKnown RBP17.13■□□□□ 0.33
RPS28-203ENST00000600659 PPEF2O14830 753 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 ZNF202O95125 648 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 RPL17P18621 184 aaKnown RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 POSTNQ15063 836 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 BRSK2Q8IWQ3 736 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 RIN2Q8WYP3 895 aaPredicted RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 CASP10Q92851 521 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 CLSTN3Q9BQT9 956 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 EMILIN2Q9BXX0 1053 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
RPS28-203ENST00000600659 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
RPS28-203ENST00000600659 GOLGA8IPA6NC78 632 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 GOLGA8JA6NMD2 632 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 DLL1O00548 723 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 ADAM12O43184 909 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 MYL1P05976 194 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 TKTP29401 623 aaKnown RBP17.11■□□□□ 0.33
RPS28-203ENST00000600659 AARSP49588 968 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPS28-203ENST00000600659 ELAVL2Q12926 359 aaKnown RBP17.11■□□□□ 0.33
RPS28-203ENST00000600659 KANK3Q6NY19 840 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 LILRA6Q6PI73 481 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
RPS28-203ENST00000600659 CD302Q8IX05 232 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 SYCP3Q8IZU3 236 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 FAM84AQ96KN4 292 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 TSPAN18Q96SJ8 248 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 ASB7Q9H672 318 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 AGPAT3Q9NRZ7 376 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 DERAQ9Y315 318 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 C2CD2Q9Y426 696 aa17.11■□□□□ 0.33
RPS28-203ENST00000600659 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 PAPLNO95428 1278 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 RPN1P04843 607 aaKnown RBP17.1■□□□□ 0.33
RPS28-203ENST00000600659 KLRC2P26717 231 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 ZP2Q05996 745 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 SCARA3Q6AZY7 606 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 KIAA1841Q6NSI8 718 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 ARMCX5Q6P1M9 558 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 NELFCDQ8IXH7 590 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
RPS28-203ENST00000600659 FAM212AQ96EL1 285 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 SUSD3Q96L08 255 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 FBXL18Q96ME1 805 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.332e-11■■□□□ 13.6
RPS28-203ENST00000600659 MTRRQ9UBK8 725 aa17.1■□□□□ 0.33
RPS28-203ENST00000600659 DOCK8Q8NF50 2099 aa17.09■□□□□ 0.33
RPS28-203ENST00000600659 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms