RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
HIF3A-218ENST00000600383 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-218ENST00000600383 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
HIF3A-218ENST00000600383 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
HIF3A-218ENST00000600383 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
HIF3A-218ENST00000600383 B4GALT4O60513 344 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 CCND3P30281 292 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-218ENST00000600383 CXCR5P32302 372 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 PTPROQ16827 1216 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 THAP2Q9H0W7 228 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 SEPT4O43236 478 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 IL18RAPO95256 599 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 NFICP08651 508 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 GNAT1P11488 350 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
HIF3A-218ENST00000600383 GJA9P57773 515 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 FAM47CQ5HY64 1035 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 INTUQ9ULD6 942 aa16.28■□□□□ 0.2
HIF3A-218ENST00000600383 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-218ENST00000600383 BRCA2P51587 3418 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 TADA3O75528 432 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 NPTXRO95502 500 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 ASS1P00966 412 aaKnown RBP16.27■□□□□ 0.2
HIF3A-218ENST00000600383 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
HIF3A-218ENST00000600383 DARSP14868 501 aaKnown RBP16.27■□□□□ 0.2
HIF3A-218ENST00000600383 CD58P19256 250 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-218ENST00000600383 FMO1Q01740 532 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 CDR2Q01850 454 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 WHAMMP3Q1A5X7 153 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 SLC10A6Q3KNW5 377 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 SLC35G2Q8TBE7 412 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-218ENST00000600383 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
HIF3A-218ENST00000600383 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 ANKRD62A6NC57 917 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 BTNL10A8MVZ5 291 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 MEFVO15553 781 aaPredicted RBP16.27■□□□□ 0.19
HIF3A-218ENST00000600383 TBXAS1P24557 533 aaPredicted RBP16.27■□□□□ 0.19
HIF3A-218ENST00000600383 IFI16Q16666 785 aaKnown RBP16.27■□□□□ 0.19
HIF3A-218ENST00000600383 NBPF20Q3BBV1 942 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 CAGE1Q8TC20 777 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 EPC1Q9H2F5 836 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 XPNPEP3Q9NQH7 507 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 NXF1Q9UBU9 619 aaKnown RBP16.27■□□□□ 0.19
HIF3A-218ENST00000600383 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.19
HIF3A-218ENST00000600383 SNX12Q9UMY4 172 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 PCDHGC5Q9Y5F6 944 aa16.27■□□□□ 0.19
HIF3A-218ENST00000600383 KPNA6O60684 536 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 RTN2O75298 545 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 WEE2P0C1S8 567 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 TMEM253P0C7T8 217 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
HIF3A-218ENST00000600383 SSTR3P32745 418 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-218ENST00000600383 APLP1P51693 650 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 SCARA5Q6ZMJ2 495 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 DDX1Q92499 740 aaKnown RBP16.26■□□□□ 0.19
HIF3A-218ENST00000600383 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 EIF2AQ9BY44 585 aaKnown RBP16.26■□□□□ 0.19
HIF3A-218ENST00000600383 HES2Q9Y543 173 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 PCDHB2Q9Y5E7 798 aa16.26■□□□□ 0.19
HIF3A-218ENST00000600383 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 HTRA3P83110 453 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 SNX17Q15036 470 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 ZNF394Q53GI3 561 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-218ENST00000600383 TPCN2Q8NHX9 752 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 OSBPL9Q96SU4 736 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-218ENST00000600383 ISCUQ9H1K1 167 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 ITGB3P05106 788 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 BPIFB4P59827 614 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 KYAT1Q16773 422 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 WDR72Q3MJ13 1102 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 NOTUMQ6P988 496 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 SLC27A1Q6PCB7 646 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 DAAM2Q86T65 1068 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 C1orf127Q8N9H9 656 aa16.25■□□□□ 0.19
HIF3A-218ENST00000600383 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms