RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 KANK3Q6NY19 840 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 PRSS55Q6UWB4 352 aaPredicted RBP24.81■■□□□ 1.56
IRF3-220ENST00000598108 CEP57Q86XR8 500 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 TTPALQ9BTX7 342 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 CUL9Q8IWT3 2517 aa24.81■■□□□ 1.56
IRF3-220ENST00000598108 TCF20Q9UGU0 1960 aaKnown RBP24.8■■□□□ 1.56
IRF3-220ENST00000598108 SRGAP2BP0DMP2 458 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 GUCY2FP51841 1108 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 PPFIBP1Q86W92 1011 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 GPR65Q8IYL9 337 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 C12orf76Q8N812 135 aaPredicted RBP24.8■■□□□ 1.56
IRF3-220ENST00000598108 LNX1Q8TBB1 728 aaPredicted RBP24.8■■□□□ 1.56
IRF3-220ENST00000598108 FEZF2Q8TBJ5 459 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 ZNF507Q8TCN5 953 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 CBWD1Q9BRT8 395 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 TMEM206Q9H813 350 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 CD320Q9NPF0 282 aa24.8■■□□□ 1.56
IRF3-220ENST00000598108 USP15Q9Y4E8 981 aaPredicted RBP24.8■■□□□ 1.56
IRF3-220ENST00000598108 FGFR3P22607 806 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 ELAVL2Q12926 359 aaKnown RBP24.79■■□□□ 1.56
IRF3-220ENST00000598108 JADE1Q6IE81 842 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 STXBP4Q6ZWJ1 553 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 SCFD1Q8WVM8 642 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 SAAL1Q96ER3 474 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 FAM213AQ9BRX8 229 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 PCIF1Q9H4Z3 704 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 SLC39A2Q9NP94 309 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 CDH22Q9UJ99 828 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 MUC3AQ02505 3323 aa24.79■■□□□ 1.56
IRF3-220ENST00000598108 EIF3DO15371 548 aaKnown RBP eCLIP24.78■■□□□ 1.56
IRF3-220ENST00000598108 NFICP08651 508 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 HOXB8P17481 243 aaPredicted RBP24.78■■□□□ 1.56
IRF3-220ENST00000598108 GARTP22102 1010 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.78■■□□□ 1.56
IRF3-220ENST00000598108 CD302Q8IX05 232 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 PIK3R5Q8WYR1 880 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 SUSD6Q92537 303 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 FBXL18Q96ME1 805 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 FNIP2Q9P278 1114 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 UBQLN1Q9UMX0 589 aaKnown RBP24.78■■□□□ 1.56
IRF3-220ENST00000598108 FAM50BQ9Y247 325 aa24.78■■□□□ 1.56
IRF3-220ENST00000598108 GOLGA8IPA6NC78 632 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 GOLGA8JA6NMD2 632 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 ADAM12O43184 909 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 ZNF202O95125 648 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 ADH1AP07327 375 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 PRR29P0C7W0 189 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 TKTP29401 623 aaKnown RBP24.77■■□□□ 1.56
IRF3-220ENST00000598108 LRPAP1P30533 357 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 WNT7BP56706 349 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 KMT5BQ4FZB7 885 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 SPATA1Q5VX52 437 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 PALB2Q86YC2 1186 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 GLYCTKQ8IVS8 523 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 TSPAN18Q96SJ8 248 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 CLSTN3Q9BQT9 956 aa24.77■■□□□ 1.56
IRF3-220ENST00000598108 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.77■■□□□ 1.56
IRF3-220ENST00000598108 TRIP11Q15643 1979 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 TGFB1I1O43294 461 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 SPATA31D3P0C874 917 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 CYP3A5P20815 502 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 POU5F1Q01860 360 aaKnown RBP24.76■■□□□ 1.55
IRF3-220ENST00000598108 KRBA2Q6ZNG9 492 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 SPATA31D4Q6ZUB0 917 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 NELFCDQ8IXH7 590 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 ASB7Q9H672 318 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 CIZ1Q9ULV3 898 aaPredicted RBP24.76■■□□□ 1.55
IRF3-220ENST00000598108 C5orf42Q9H799 3197 aa24.76■■□□□ 1.55
IRF3-220ENST00000598108 TCHHQ07283 1943 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 PPEF2O14830 753 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 TRAPPC3O43617 180 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 WEE2P0C1S8 567 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 ZP2Q05996 745 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 STK4Q13043 487 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 PSMD5Q16401 504 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 RARS2Q5T160 578 aaKnown RBP24.75■■□□□ 1.55
IRF3-220ENST00000598108 ARMCX5Q6P1M9 558 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 LILRA6Q6PI73 481 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 RSPO2Q6UXX9 243 aaPredicted RBP24.75■■□□□ 1.55
IRF3-220ENST00000598108 ADAM7Q9H2U9 754 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 DZANK1Q9NVP4 752 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 DERAQ9Y315 318 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 NUB1Q9Y5A7 615 aa24.75■■□□□ 1.55
IRF3-220ENST00000598108 TNFRSF10AO00220 468 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 TGM5O43548 720 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 EXTL3O43909 919 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 GLUD1P00367 558 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 TMEM132DQ14C87 1099 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 ADHFE1Q8IWW8 467 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 EFCAB13Q8IY85 973 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 FMR1NBQ8N0W7 255 aaPredicted RBP24.74■■□□□ 1.55
IRF3-220ENST00000598108 SUSD3Q96L08 255 aa24.74■■□□□ 1.55
IRF3-220ENST00000598108 XPOTO43592 962 aaKnown RBP24.73■■□□□ 1.55
IRF3-220ENST00000598108 MYL1P05976 194 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 CREMQ03060 361 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 DPYDQ12882 1025 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 BMT2Q1RMZ1 405 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 TMC5Q6UXY8 1006 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 BRSK2Q8IWQ3 736 aa24.73■■□□□ 1.55
IRF3-220ENST00000598108 GJD3Q8N144 294 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms