RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 COL4A3Q01955 1670 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 STX6O43752 255 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 GFRA3O60609 400 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 STRN3Q13033 797 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 RESTQ13127 1097 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 VARS2Q5ST30 1063 aaKnown RBP16.57■□□□□ 0.24
TGFB1-202ENST00000597453 ARL6IP4Q66PJ3 421 aaKnown RBP16.57■□□□□ 0.24
TGFB1-202ENST00000597453 PARM1Q6UWI2 310 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 ANKS3Q6ZW76 656 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 TMEM130Q8N3G9 435 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 KCTD17Q8N5Z5 321 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 FGF13Q92913 245 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 FGF14Q92915 247 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 CDK5RAP3Q96JB5 506 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 SLC38A7Q9NVC3 462 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
TGFB1-202ENST00000597453 XYLBO75191 536 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 TOM1L1O75674 476 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 BMP15O95972 392 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 POU2F2P09086 479 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
TGFB1-202ENST00000597453 SMTNP53814 917 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 ROR1Q01973 937 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 GRIN1Q05586 938 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
TGFB1-202ENST00000597453 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 SLC10A6Q3KNW5 377 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 SLC8B1Q6J4K2 584 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 CCDC105Q8IYK2 499 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 HAPLN2Q9GZV7 340 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
TGFB1-202ENST00000597453 ZFP37Q9Y6Q3 630 aaPredicted RBP16.56■□□□□ 0.24
TGFB1-202ENST00000597453 FAM186AA6NE01 2351 aa16.56■□□□□ 0.24
TGFB1-202ENST00000597453 PTPRZ1P23471 2315 aaPredicted RBP16.55■□□□□ 0.24
TGFB1-202ENST00000597453 WDR27A2RRH5 827 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 MCL1Q07820 350 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 RTP3Q9BQQ7 232 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
TGFB1-202ENST00000597453 TBC1D17Q9HA65 648 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 SLC2A4RGQ9NR83 387 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
TGFB1-202ENST00000597453 CFAP54Q96N23 3096 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 STK25O00506 426 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 SYN3O14994 580 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 TBC1D4O60343 1298 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 CXCL8P10145 99 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 RPL9P32969 192 aaKnown RBP16.54■□□□□ 0.24
TGFB1-202ENST00000597453 NBL1P41271 181 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 SPAG1Q07617 926 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 MRPL58Q14197 206 aaKnown RBP16.54■□□□□ 0.24
TGFB1-202ENST00000597453 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
TGFB1-202ENST00000597453 ASCL5Q7RTU5 278 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 AK8Q96MA6 479 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 BLOC1S4Q9NUP1 217 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 KCNG1Q9UIX4 513 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
TGFB1-202ENST00000597453 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ANK1P16157 1881 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 CLDN3O15551 220 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ABLIM3O94929 683 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 SEC24AO95486 1093 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 TNFSF9P41273 254 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ARPP19P56211 112 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 GPC5P78333 572 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
TGFB1-202ENST00000597453 SLC5A9Q2M3M2 681 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 POTEHQ6S545 545 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 HAUS6Q7Z4H7 955 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 FRMD5Q7Z6J6 570 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ZNF461Q8TAF7 563 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 SUSD3Q96L08 255 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
TGFB1-202ENST00000597453 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
TGFB1-202ENST00000597453 ARHGEF37A1IGU5 675 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 SLC26A4O43511 780 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 RHOP08100 348 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 PLCG1P19174 1290 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 RFX1P22670 979 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 MCM4P33991 863 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 UBA7P41226 1012 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.24
TGFB1-202ENST00000597453 KARSQ15046 597 aaKnown RBP16.52■□□□□ 0.24
TGFB1-202ENST00000597453 ANGPT1Q15389 498 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
TGFB1-202ENST00000597453 ZBTB41Q5SVQ8 909 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 MTSS1LQ765P7 747 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms