RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 RGS18Q9NS28 235 aa12.39□□□□□ -0.43
SH2D3A-206ENST00000597254 PARP2Q9UGN5 583 aa12.39□□□□□ -0.43
SH2D3A-206ENST00000597254 ANK1P16157 1881 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 RECQL4O94761 1208 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 CXCL10P02778 98 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 CA3P07451 260 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 SKIP12755 728 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 ITGA4P13612 1032 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 RAB27AP51159 221 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 EPC2Q52LR7 807 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 XKR4Q5GH76 650 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 FAM43BQ6ZT52 329 aaPredicted RBP12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 HACE1Q8IYU2 909 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 NEK11Q8NG66 645 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 SEPT8Q92599 483 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 FAM84AQ96KN4 292 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 SNX27Q96L92 541 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 CXCL16Q9H2A7 254 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 SIX2Q9NPC8 291 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
SH2D3A-206ENST00000597254 C9IYK1 514 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 ENPP3O14638 875 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TLL1O43897 1013 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 PHACTR2O75167 634 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 LRRN2O75325 713 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 NOL4O94818 638 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 VNN1O95497 513 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CST3P01034 146 aaPredicted RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TNNC2P02585 160 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 GYPCP04921 128 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 NFICP08651 508 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CASP14P31944 242 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 FAM189BP81408 668 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 APBA1Q02410 837 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 BIRC3Q13489 604 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TRIM14Q14142 442 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 ADGRE1Q14246 886 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 ZBTB6Q15916 424 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TRIM65Q6PJ69 517 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 AGMOQ6ZNB7 445 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 ECHDC2Q86YB7 292 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 NT5DC4Q86YG4 428 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TAS1R2Q8TE23 839 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 LINC01599Q8WXQ3 324 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 APBB2Q92870 758 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 LPPQ93052 612 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 PGBD4Q96DM1 585 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 ZMAT2Q96NC0 199 aaKnown RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TSPAN18Q96SJ8 248 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TTYH3Q9C0H2 523 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 MTMR12Q9C0I1 747 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 INTS2Q9H0H0 1204 aaKnown RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 FAM207AQ9NSI2 230 aaPredicted RBP12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 GCNT4Q9P109 453 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CNTN3Q9P232 1028 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CAPN11Q9UMQ6 739 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 DERAQ9Y315 318 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 C2CD2Q9Y426 696 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 CITO14578 2027 aa12.37□□□□□ -0.43
SH2D3A-206ENST00000597254 TTC28Q96AY4 2481 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 PRUNE2Q8WUY3 3088 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 A0A1W2PQJ5 194 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 AKR1B15C9JRZ8 316 aaPredicted RBP12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 EPHB6O15197 1021 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 EFCAB14O75071 495 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 EOMESO95936 686 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 TPM1P09493 284 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 KCNE1P15382 129 aa12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 TRIM21P19474 475 aaKnown RBP12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 ADKP55263 362 aaKnown RBP12.36□□□□□ -0.43
SH2D3A-206ENST00000597254 GSDMDP57764 484 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms