RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SFXN1Q9H9B4 322 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 RPF1Q9H9Y2 349 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
SHKBP1-202ENST00000593764 PDCD11Q14690 1871 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 ADAM12O43184 909 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 GCNT3O95395 438 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 TKTP29401 623 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 MTHFRP42898 656 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 PSMD5Q16401 504 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 SLFN12LQ6IEE8 588 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 GPR149Q86SP6 731 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 NECTIN4Q96NY8 510 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 LRRC27Q9C0I9 530 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 PCDHB13Q9Y5F0 798 aa20.13■□□□□ 0.81
SHKBP1-202ENST00000593764 TRAPPC3O43617 180 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 PAPLNO95428 1278 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 ACOT2P49753 483 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 PPP2R3AQ06190 1150 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 ATAT1Q5SQI0 421 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 ADALQ6DHV7 355 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 CRELD2Q6UXH1 353 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 RSPO2Q6UXX9 243 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 CMASQ8NFW8 434 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 HDAC7Q8WUI4 952 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 LEO1Q8WVC0 666 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 HPS3Q969F9 1004 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 KIF12Q96FN5 646 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 RIPOR3Q96MK2 946 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 ACCSQ96QU6 501 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 C7orf25Q9BPX7 421 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 FAM13BQ9NYF5 915 aa20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 AGO2Q9UKV8 859 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-202ENST00000593764 RFPL2O75678 378 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 CYP3A5P20815 502 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 LRPAP1P30533 357 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 AMPD3Q01432 767 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 PDXDC1Q6P996 788 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 C15orf39Q6ZRI6 1047 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 TSPAN18Q96SJ8 248 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 PLEKHA4Q9H4M7 779 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 C11orf16Q9NQ32 467 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 MTRRQ9UBK8 725 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 KCNH3Q9ULD8 1083 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 UBQLN1Q9UMX0 589 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 EXOC7Q9UPT5 735 aa20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 MTCL1Q9Y4B5 1905 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-202ENST00000593764 CCDC195A0A1B0GUA6 201 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 DCXO43602 365 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 PRPF6O94906 941 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 ALADP13716 330 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 SP100P23497 879 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 CASP1P29466 404 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 GUCY2FP51841 1108 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 KRT85P78386 507 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 ALCAMQ13740 583 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 POSTNQ15063 836 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 JADE1Q6IE81 842 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 CD302Q8IX05 232 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 KREMEN2Q8NCW0 462 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 ZSWIM2Q8NEG5 633 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 POMGNT1Q8WZA1 660 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 FAM212AQ96EL1 285 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 SUSD3Q96L08 255 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 SPATA32Q96LK8 384 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 C1QTNF1Q9BXJ1 281 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 RHOBTB2Q9BYZ6 727 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 MAGEF1Q9HAY2 307 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 DPP7Q9UHL4 492 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 MUTYHQ9UIF7 546 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 BACE2Q9Y5Z0 518 aa20.1■□□□□ 0.81
SHKBP1-202ENST00000593764 SPDYE4A6NLX3 237 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 TBC1D4O60343 1298 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 CMA1P23946 247 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 OR1D2P34982 312 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 HOXD13P35453 343 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 ASIC1P78348 528 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 POU5F1Q01860 360 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 EHHADHQ08426 723 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 RAB33AQ14088 237 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 MRPL58Q14197 206 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 BECN1Q14457 450 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 SPATA1Q5VX52 437 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 ANKS3Q6ZW76 656 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 ZNF707Q96C28 371 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 FBXW11Q9UKB1 542 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 NUB1Q9Y5A7 615 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 TCHHQ07283 1943 aa20.09■□□□□ 0.81
SHKBP1-202ENST00000593764 C2orf16Q68DN1 1984 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 C2CD4DB7Z1M9 353 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 SYN3O14994 580 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 NFICP08651 508 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 VARS2Q5ST30 1063 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 BLZF1Q9H2G9 400 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 ASB7Q9H672 318 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 SERTAD1Q9UHV2 236 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 DERAQ9Y315 318 aa20.08■□□□□ 0.81
SHKBP1-202ENST00000593764 NR2E1Q9Y466 385 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms