RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 CUL2Q13617 745 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 FAM71AQ8IYT1 594 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 TAF4BQ92750 862 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 KAT5Q92993 513 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 KREMEN1Q96MU8 473 aa16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 EIF2AQ9BY44 585 aaKnown RBP16.03■□□□□ 0.16
GTF2F1-202ENST00000593678 A0A087X0T9 212 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 FAM228BP0C875 321 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 BPIFB4P59827 614 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 SLC10A6Q3KNW5 377 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 FAM228AQ86W67 206 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 SECISBP2LQ93073 1101 aaKnown RBP16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 APOL6Q9BWW8 343 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 SENP6Q9GZR1 1112 aaPredicted RBP16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 TRMT13Q9NUP7 481 aaKnown RBP16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 SNTG2Q9NY99 539 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 DERAQ9Y315 318 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 NOC2LQ9Y3T9 749 aaKnown RBP16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 CITO14578 2027 aa16.02■□□□□ 0.16
GTF2F1-202ENST00000593678 ZNF263O14978 683 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 CYP26A1O43174 497 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 CAND2O75155 1236 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 P4HA1P13674 534 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 NAP1L1P55209 391 aaKnown RBP16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 MYL6P60660 151 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 YWHAEP62258 255 aaKnown RBP16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ZNF569Q5MCW4 686 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 SPOPLQ6IQ16 392 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ALKBH5Q6P6C2 394 aaKnown RBP16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 AGPAT1Q99943 283 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 NIF3L1Q9GZT8 377 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 CHST12Q9NRB3 414 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 PARP2Q9UGN5 583 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ITGA11Q9UKX5 1188 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ST3GAL5Q9UNP4 418 aa16.02■□□□□ 0.15
GTF2F1-202ENST00000593678 ANK1P16157 1881 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 XPOTO43592 962 aaKnown RBP16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 ITGB3P05106 788 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 ATICP31939 592 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 ARHGAP25P42331 645 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 PAK2Q13177 524 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 NAB2Q15742 525 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 SNX27Q96L92 541 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 ALS2CR12Q96Q35 445 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 NXF3Q9H4D5 531 aaKnown RBP16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 NAGPAQ9UK23 515 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 PCDHB4Q9Y5E5 795 aa16.01■□□□□ 0.15
GTF2F1-202ENST00000593678 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 MACROD2A1Z1Q3 448 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 DNM1LO00429 736 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 MYCP01106 439 aaPredicted RBP16■□□□□ 0.15
GTF2F1-202ENST00000593678 CHRNA1P02708 482 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 ZNF667Q5HYK9 610 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 C1orf127Q8N9H9 656 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 BEST2Q8NFU1 509 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 WNT8BQ93098 351 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 ELMO3Q96BJ8 720 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 TSPAN18Q96SJ8 248 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 RNF208Q9H0X6 261 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
GTF2F1-202ENST00000593678 DPP3Q9NY33 737 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 HES2Q9Y543 173 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
GTF2F1-202ENST00000593678 A0A0U1RQJ8 604 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 RECQL4O94761 1208 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 CYP11B1P15538 503 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 RBP5P82980 135 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 MGAT3Q09327 533 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 TMEM270Q6UE05 265 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 USP38Q8NB14 1042 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 EPS8L1Q8TE68 723 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 FAXDC2Q96IV6 333 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 ARID3AQ99856 593 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 PDCL3Q9H2J4 239 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 HTTP42858 3142 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 CTAGE9A4FU28 777 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 ARVCFO00192 962 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 DDX3XO00571 662 aaKnown RBP eCLIP15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 PJA2O43164 708 aa15.99■□□□□ 0.15
GTF2F1-202ENST00000593678 TACC1O75410 805 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms