RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 MTMR9Q96QG7 549 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 TRMT61BQ9BVS5 477 aaKnown RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 EIF2AQ9BY44 585 aaKnown RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 PLA2G2FQ9BZM2 168 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 CSRNP2Q9H175 543 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 MINDY3Q9H8M7 445 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 ZFP14Q9HCL3 533 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 HCFC1R1Q9NWW0 138 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 ZZEF1O43149 2961 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 CHURC1-FNTBB4DL54 471 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 TSPAN1O60635 241 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 KCNK5O95279 499 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 TDP2O95551 362 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 RHOP08100 348 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 OR52Z1P0C646 297 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 HOXA6P31267 233 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 FNTBP49356 437 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 PPP2R5CQ13362 524 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 TUSC3Q13454 348 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 RAB33AQ14088 237 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 CALCRLQ16602 461 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 STPG1Q5TH74 334 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 TANGO2Q6ICL3 276 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 B3GNT9Q6UX72 402 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 CLEC17AQ6ZS10 378 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
SDF2-209ENST00000591903 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
SDF2-209ENST00000591903 HES2Q9Y543 173 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 PIAS3Q9Y6X2 628 aa11.26□□□□□ -0.61
SDF2-209ENST00000591903 ZFYVE26Q68DK2 2539 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 C1QTNF9BB2RNN3 333 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 SLC37A4O43826 429 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PPP6R2O75170 966 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 MICAL2O94851 1124 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 CHRNB1P11230 501 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PTPN2P17706 415 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PSMC3P17980 439 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 MUTP22033 750 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
SDF2-209ENST00000591903 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
SDF2-209ENST00000591903 KRT85P78386 507 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 POU5F1BQ06416 359 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PTGDRQ13258 359 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PKP1Q13835 747 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PDIA5Q14554 519 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 MXD4Q14582 209 aaPredicted RBP11.25□□□□□ -0.61
SDF2-209ENST00000591903 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 PLA2G4FQ68DD2 849 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 C4orf32Q8N8J7 132 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 CEP170P1Q96L14 293 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 AK8Q96MA6 479 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 APOL6Q9BWW8 343 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
SDF2-209ENST00000591903 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
SDF2-209ENST00000591903 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
SDF2-209ENST00000591903 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
SDF2-209ENST00000591903 K7ESF4 209 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 ZNF197O14709 1029 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 EPN2O95208 641 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 FCARP24071 287 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 MCM7P33993 719 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 NPEPPSP55786 919 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 PTENP60484 403 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 SRSF5Q13243 272 aaKnown RBP11.24□□□□□ -0.61
SDF2-209ENST00000591903 TFDP1Q14186 410 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 GRM2Q14416 872 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 PTPAQ15257 358 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 SF3A2Q15428 464 aaKnown RBP11.24□□□□□ -0.61
SDF2-209ENST00000591903 SLC5A9Q2M3M2 681 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 SLC27A1Q6PCB7 646 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.24□□□□□ -0.61
SDF2-209ENST00000591903 WDR5BQ86VZ2 330 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
SDF2-209ENST00000591903 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 HAS1Q92839 578 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 COL26A1Q96A83 441 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 CPB2Q96IY4 423 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
SDF2-209ENST00000591903 PCDHGA5Q9Y5G8 931 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms