RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 GAP43P17677 238 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 SCP2P22307 547 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 HOXD13P35453 343 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 L1TD1Q5T7N2 865 aaKnown RBP23.27■■□□□ 1.32
LRP3-202ENST00000590275 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.27■■□□□ 1.32
LRP3-202ENST00000590275 LEO1Q8WVC0 666 aaPredicted RBP23.27■■□□□ 1.32
LRP3-202ENST00000590275 TNMDQ9H2S6 317 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 PLEKHA5Q9HAU0 1116 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.27■■□□□ 1.32
LRP3-202ENST00000590275 SLC38A7Q9NVC3 462 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 RAPGEFL1Q9UHV5 662 aa23.27■■□□□ 1.32
LRP3-202ENST00000590275 C2CD4DB7Z1M9 353 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 PRPF6O94906 941 aaKnown RBP23.26■■□□□ 1.31
LRP3-202ENST00000590275 GCNT3O95395 438 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 PAPLNO95428 1278 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 ATL3Q6DD88 541 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 CES5AQ6NT32 575 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 GRAMD1CQ8IYS0 662 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 KIF12Q96FN5 646 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 MTRRQ9UBK8 725 aa23.26■■□□□ 1.31
LRP3-202ENST00000590275 DCXO43602 365 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 TBC1D4O60343 1298 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 NFICP08651 508 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 SCARA3Q6AZY7 606 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 ADALQ6DHV7 355 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 JADE1Q6IE81 842 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 CMASQ8NFW8 434 aaPredicted RBP23.25■■□□□ 1.31
LRP3-202ENST00000590275 HVCN1Q96D96 273 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 FAM84AQ96KN4 292 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 BLZF1Q9H2G9 400 aa23.25■■□□□ 1.31
LRP3-202ENST00000590275 RPF1Q9H9Y2 349 aaKnown RBP23.25■■□□□ 1.31
LRP3-202ENST00000590275 CCDC195A0A1B0GUA6 201 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 N4BP1O75113 896 aaKnown RBP23.24■■□□□ 1.31
LRP3-202ENST00000590275 LRPAP1P30533 357 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 RPL9P32969 192 aaKnown RBP23.24■■□□□ 1.31
LRP3-202ENST00000590275 MTHFRP42898 656 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 ELAVL2Q12926 359 aaKnown RBP23.24■■□□□ 1.31
LRP3-202ENST00000590275 CNNM4Q6P4Q7 775 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 IQUBQ8NA54 791 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 KREMEN2Q8NCW0 462 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 C7orf25Q9BPX7 421 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 LRFN3Q9BTN0 628 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 TSHZ2Q9NRE2 1034 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 FBXW11Q9UKB1 542 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 AGO2Q9UKV8 859 aaKnown RBP23.24■■□□□ 1.31
LRP3-202ENST00000590275 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
LRP3-202ENST00000590275 OR1D2P34982 312 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 PPP2R3AQ06190 1150 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 EHHADHQ08426 723 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 MRPL58Q14197 206 aaKnown RBP23.23■■□□□ 1.31
LRP3-202ENST00000590275 ATAT1Q5SQI0 421 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 VARS2Q5ST30 1063 aaKnown RBP23.23■■□□□ 1.31
LRP3-202ENST00000590275 FAM212AQ96EL1 285 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 SUSD3Q96L08 255 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 RIPOR3Q96MK2 946 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 NECTIN4Q96NY8 510 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 ACCSQ96QU6 501 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 CBWD1Q9BRT8 395 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 CUEDC2Q9H467 287 aa23.23■■□□□ 1.31
LRP3-202ENST00000590275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.22■■□□□ 1.31
LRP3-202ENST00000590275 SPTLC1O15269 473 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 ACTN4O43707 911 aaKnown RBP23.22■■□□□ 1.31
LRP3-202ENST00000590275 CUL4BQ13620 913 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 RAB33AQ14088 237 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 SPATA1Q5VX52 437 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 C15orf39Q6ZRI6 1047 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 EPM2AIP1Q7L775 607 aaPredicted RBP23.22■■□□□ 1.31
LRP3-202ENST00000590275 EFCAB13Q8IY85 973 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 POMGNT1Q8WZA1 660 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 SAAL1Q96ER3 474 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 SERTAD1Q9UHV2 236 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 CDY1Q9Y6F8 540 aa23.22■■□□□ 1.31
LRP3-202ENST00000590275 A0A1B0GVL5 298 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 GPR37L1O60883 481 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 C1RP00736 705 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 ABCD1P33897 745 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 AARSP49588 968 aaKnown RBP eCLIP23.21■■□□□ 1.31
LRP3-202ENST00000590275 ASIC1P78348 528 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 CCDC65Q8IXS2 484 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 HDAC7Q8WUI4 952 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 C1QTNF1Q9BXJ1 281 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 SMOC2Q9H3U7 446 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 PLEKHA4Q9H4M7 779 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 KCNH3Q9ULD8 1083 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 UBQLN1Q9UMX0 589 aaKnown RBP23.21■■□□□ 1.31
LRP3-202ENST00000590275 HPSEQ9Y251 543 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 TIMM13Q9Y5L4 95 aaPredicted RBP23.21■■□□□ 1.31
LRP3-202ENST00000590275 BACE2Q9Y5Z0 518 aa23.21■■□□□ 1.31
LRP3-202ENST00000590275 CITO14578 2027 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 PDCD11Q14690 1871 aaKnown RBP23.2■■□□□ 1.3
LRP3-202ENST00000590275 GOLGA8IPA6NC78 632 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 GOLGA8JA6NMD2 632 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 ZMYND10O75800 440 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 PFKFB1P16118 471 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 CYP3A5P20815 502 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 AFMP43652 599 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 CREMQ03060 361 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 KYAT1Q16773 422 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 SLFN12LQ6IEE8 588 aa23.2■■□□□ 1.3
LRP3-202ENST00000590275 FAM213AQ9BRX8 229 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms