RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TAS1R2Q8TE23 839 aa24.42■■□□□ 1.5
ACTN4-210ENST00000588618 SEMA4DQ92854 862 aa24.42■■□□□ 1.5
ACTN4-210ENST00000588618 TDRD15B5MCY1 1934 aaKnown RBP24.42■■□□□ 1.5
ACTN4-210ENST00000588618 PTGESO14684 152 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 PMM2O15305 246 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 VNN1O95497 513 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 PIK3CAP42336 1068 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 TRAPPC11Q7Z392 1133 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.41■■□□□ 1.5
ACTN4-210ENST00000588618 CCDC150Q8NCX0 1101 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 PLAGL2Q9UPG8 496 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 COQ4Q9Y3A0 265 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.41■■□□□ 1.5
ACTN4-210ENST00000588618 ZBBXA8MT70 800 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 KRT19P08727 400 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 PON1P27169 355 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 SCNN1GP51170 649 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 SPECC1LQ69YQ0 1117 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.41■■□□□ 1.52e-6■□□□□ 11.3
ACTN4-210ENST00000588618 HELQQ8TDG4 1101 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 ELMO3Q96BJ8 720 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 IMPG2Q9BZV3 1241 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 SIX2Q9NPC8 291 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 DPP3Q9NY33 737 aa24.41■■□□□ 1.5
ACTN4-210ENST00000588618 ITIH6Q6UXX5 1313 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 SCN1AP35498 2009 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 UPP2O95045 317 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 FGFR1P11362 822 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 GUCY2FP51841 1108 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 ZBTB6Q15916 424 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 CXorf38Q8TB03 319 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 RAB20Q9NX57 234 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 KANSL3Q9P2N6 904 aa24.4■■□□□ 1.5
ACTN4-210ENST00000588618 PTPRSQ13332 1948 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 OFD1O75665 1012 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 NOL4O94818 638 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 TRIM21P19474 475 aaKnown RBP24.39■■□□□ 1.5
ACTN4-210ENST00000588618 NCOA4Q13772 614 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 ZNF365Q70YC5 407 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 C1orf127Q8N9H9 656 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 C18orf25Q96B23 403 aaPredicted RBP24.39■■□□□ 1.5
ACTN4-210ENST00000588618 TTYH3Q9C0H2 523 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 MIOSQ9NXC5 875 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 ITGA11Q9UKX5 1188 aa24.39■■□□□ 1.5
ACTN4-210ENST00000588618 RNF225M0QZC1 329 aaPredicted RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 POMCP01189 267 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 ITGB3P05106 788 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 WDR5P61964 334 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 GRIK3Q13003 919 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 TBX2Q13207 712 aaPredicted RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 NOMO2Q5JPE7 1267 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 WDR44Q5JSH3 913 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 TRIM65Q6PJ69 517 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 CRIPAKQ8N1N5 446 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 RSPH1Q8WYR4 309 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 LSM14BQ9BX40 385 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 INTS2Q9H0H0 1204 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 MTIF3Q9H2K0 278 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.38■■□□□ 1.496e-7■■■■■ 112.8
ACTN4-210ENST00000588618 FAM207AQ9NSI2 230 aaPredicted RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 TUBGCP4Q9UGJ1 667 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 SIX4Q9UIU6 781 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 GOLGA6L6A8MZA4 724 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 CST3P01034 146 aaPredicted RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 HLA-DRAP01903 254 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 CYP3A5P20815 502 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 RNASELQ05823 741 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 CLLU1OSQ5K130 101 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 NEK11Q8NG66 645 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 PPP1R10Q96QC0 940 aaKnown RBP24.38■■□□□ 1.49
ACTN4-210ENST00000588618 PPP1R9BQ96SB3 815 aa24.38■■□□□ 1.49
ACTN4-210ENST00000588618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.38■■□□□ 1.499e-9■■■□□ 15.1
ACTN4-210ENST00000588618 CEP290O15078 2479 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 GYPCP04921 128 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 TPM1P09493 284 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 RBP5P82980 135 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 SOX4Q06945 474 aaPredicted RBP24.37■■□□□ 1.49
ACTN4-210ENST00000588618 NAB2Q15742 525 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 C16orf59Q7L2K0 433 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 EHBP1Q8NDI1 1231 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 FAM193BQ96PV7 902 aaPredicted RBP24.37■■□□□ 1.49
ACTN4-210ENST00000588618 PI4K2AQ9BTU6 479 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 GANQ9H2C0 597 aa24.37■■□□□ 1.49
ACTN4-210ENST00000588618 AJAP1Q9UKB5 411 aaPredicted RBP24.37■■□□□ 1.49
ACTN4-210ENST00000588618 RANBP2P49792 3224 aaKnown RBP24.37■■□□□ 1.49
ACTN4-210ENST00000588618 FNDC1Q4ZHG4 1894 aaPredicted RBP24.37■■□□□ 1.49
ACTN4-210ENST00000588618 POLR2BP30876 1174 aaKnown RBP24.36■■□□□ 1.49
ACTN4-210ENST00000588618 GOLGA8FQ08AF8 430 aa24.36■■□□□ 1.49
ACTN4-210ENST00000588618 GOLGA8DPQ0D2H9 430 aa24.36■■□□□ 1.49
ACTN4-210ENST00000588618 GJB7Q6PEY0 223 aa24.36■■□□□ 1.49
ACTN4-210ENST00000588618 TOP1MTQ969P6 601 aa24.36■■□□□ 1.49
ACTN4-210ENST00000588618 NUP58Q9BVL2 599 aa24.36■■□□□ 1.49
ACTN4-210ENST00000588618 MRPL9Q9BYD2 267 aaKnown RBP24.36■■□□□ 1.49
ACTN4-210ENST00000588618 INPPL1O15357 1258 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 CCDC173Q0VFZ6 552 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 SGSM1Q2NKQ1 1148 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 TMEM240Q5SV17 173 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 PPFIBP1Q86W92 1011 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 NT5C1BQ96P26 610 aa24.35■■□□□ 1.49
ACTN4-210ENST00000588618 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.35■■□□□ 1.492e-16■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms