RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 NUB1Q9Y5A7 615 aa17.43■□□□□ 0.38
ERCC1-206ENST00000588300 RIF1Q5UIP0 2472 aaKnown RBP17.42■□□□□ 0.38
ERCC1-206ENST00000588300 FAM186AA6NE01 2351 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 SFI1A8K8P3 1242 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 LRG1P02750 347 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 ELF1P32519 619 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 RPL9P32969 192 aaKnown RBP17.42■□□□□ 0.38
ERCC1-206ENST00000588300 SMTNP53814 917 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 STARD6P59095 220 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-206ENST00000588300 RABEP1Q15276 862 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 HYIQ5T013 277 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 PJA1Q8NG27 643 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 SPIRE2Q8WWL2 714 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 DLGAP2Q9P1A6 1054 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 ANKFY1Q9P2R3 1169 aa17.42■□□□□ 0.38
ERCC1-206ENST00000588300 MRPS23Q9Y3D9 190 aaKnown RBP17.42■□□□□ 0.38
ERCC1-206ENST00000588300 PTPRZ1P23471 2315 aaPredicted RBP17.42■□□□□ 0.38
ERCC1-206ENST00000588300 ARHGEF37A1IGU5 675 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 WDR27A2RRH5 827 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 H7C4K7 107 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 TOM1L1O75674 476 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 ABLIM3O94929 683 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 PLS3P13797 630 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 PFKPQ01813 784 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 PRKCQQ04759 706 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 RAD51AP2Q09MP3 1159 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
ERCC1-206ENST00000588300 ADSSL1Q8N142 457 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 SYT2Q8N9I0 419 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-206ENST00000588300 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 ZBTB45Q96K62 511 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-206ENST00000588300 KXD1Q9BQD3 176 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 FOXQ1Q9C009 403 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 SEMA4AQ9H3S1 761 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-206ENST00000588300 KCND2Q9NZV8 630 aa17.41■□□□□ 0.38
ERCC1-206ENST00000588300 VPS13AQ96RL7 3174 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 PRRG1O14668 218 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 RHOP08100 348 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 ATF2P15336 505 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 PTPN2P17706 415 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 ARPP19P56211 112 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
ERCC1-206ENST00000588300 MLF2Q15773 248 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-206ENST00000588300 ZPBP2Q6X784 338 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 C18orf25Q96B23 403 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-206ENST00000588300 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 GDE1Q9NZC3 331 aa17.4■□□□□ 0.38
ERCC1-206ENST00000588300 KANSL1LA0AUZ9 987 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 H3BQV1 296 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 CLDN3O15551 220 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 TBC1D4O60343 1298 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
ERCC1-206ENST00000588300 MCM4P33991 863 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 MRPL58Q14197 206 aaKnown RBP17.39■□□□□ 0.37
ERCC1-206ENST00000588300 SLC5A9Q2M3M2 681 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 CTXN3Q4LDR2 81 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 SLC44A4Q53GD3 710 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 TPGS2Q68CL5 300 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 ZNF280DQ6N043 979 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
ERCC1-206ENST00000588300 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 TCEAL8Q8IYN2 117 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 KCNG4Q8TDN1 519 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 MCRS1Q96EZ8 462 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 SUSD3Q96L08 255 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 PLIN2Q99541 437 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 DDX23Q9BUQ8 820 aaKnown RBP17.39■□□□□ 0.37
ERCC1-206ENST00000588300 CYP4F11Q9HBI6 524 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 LARSQ9P2J5 1176 aaKnown RBP17.39■□□□□ 0.37
ERCC1-206ENST00000588300 FBXL5Q9UKA1 691 aa17.39■□□□□ 0.37
ERCC1-206ENST00000588300 H0YCG3 227 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-206ENST00000588300 ECI2O75521 394 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 PLA2G4BP0C869 781 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 GLULP15104 373 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
ERCC1-206ENST00000588300 SLC12A3P55017 1021 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 MCL1Q07820 350 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 SLC10A6Q3KNW5 377 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 SEZ6Q53EL9 994 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
ERCC1-206ENST00000588300 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 INSL5Q9Y5Q6 135 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 R4GN57 208 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
ERCC1-206ENST00000588300 PATJQ8NI35 1801 aa17.37■□□□□ 0.37
ERCC1-206ENST00000588300 SPTBN4Q9H254 2564 aa17.37■□□□□ 0.37
ERCC1-206ENST00000588300 LRRN2O75325 713 aa17.37■□□□□ 0.37
ERCC1-206ENST00000588300 LMNAP02545 664 aaKnown RBP17.37■□□□□ 0.37
ERCC1-206ENST00000588300 SP9P0CG40 484 aa17.37■□□□□ 0.37
ERCC1-206ENST00000588300 CEBPBP17676 345 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms