RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CAND2O75155 1236 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 ITGB1P05556 798 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 PRKCBP05771 671 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 MAPTP10636 758 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 GHRP10912 638 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 DARSP14868 501 aaKnown RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 CRYBB1P53674 252 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 NLRP12P59046 1061 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 MBTD1Q05BQ5 628 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 MGAT3Q09327 533 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 STRN3Q13033 797 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 PSMD2Q13200 908 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 NT5DC1Q5TFE4 455 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 ZNF658Q5TYW1 1059 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 CDCA2Q69YH5 1023 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 KLHL10Q6JEL2 608 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 STXBP4Q6ZWJ1 553 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 CATSPER4Q7RTX7 472 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 ZNF720Q7Z2F6 126 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 SRGAP1Q7Z6B7 1085 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 KIAA2013Q8IYS2 634 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 SYCP3Q8IZU3 236 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 PHTF2Q8N3S3 785 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 KREMEN2Q8NCW0 462 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 TMEM161BQ8NDZ6 487 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 VN1R2Q8NFZ6 395 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 SPATA20Q8TB22 786 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 BICD1Q96G01 975 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 MINDY3Q9H8M7 445 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 ARHGAP28Q9P2N2 729 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 KCNG1Q9UIX4 513 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 USP20Q9Y2K6 914 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 ZNF292O60281 2723 aa9.22□□□□□ -0.93
NEDD4L-218ENST00000587547 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
NEDD4L-218ENST00000587547 RPS6KA5O75582 802 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 ERLIN2O94905 339 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 ATF7P17544 494 aaPredicted RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 BMP6P22004 513 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 SFPQP23246 707 aaKnown RBP eCLIP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 EIF4BP23588 611 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 PRCPP42785 496 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 EFNA5P52803 228 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 TYRO3Q06418 890 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 KCNA1Q09470 495 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 STIM1Q13586 685 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 ALCAMQ13740 583 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 PUM1Q14671 1186 aaKnown RBP eCLIP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 LPIN1Q14693 890 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 STX1AQ16623 288 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 MAPK6Q16659 721 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 FAM26DQ5JW98 314 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 FBXO47Q5MNV8 452 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 TRIML1Q8N9V2 468 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 SPPL3Q8TCT6 385 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 SCFD1Q8WVM8 642 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 BAP1Q92560 729 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 ACCSQ96QU6 501 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 NTPCRQ9BSD7 190 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 IKZF4Q9H2S9 585 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 PRMT7Q9NVM4 692 aaPredicted RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 TBX20Q9UMR3 447 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 NOC2LQ9Y3T9 749 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 RWDD3Q9Y3V2 267 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 UBE4BO95155 1302 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 WDR87Q6ZQQ6 2873 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 CEP250Q9BV73 2442 aa9.21□□□□□ -0.94
NEDD4L-218ENST00000587547 HNRNPDLO14979 420 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 EIF3DO15371 548 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 B4GALT5O43286 388 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 EDN1P05305 212 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 IBSPP21815 317 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 CD52P31358 61 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 MATR3P43243 847 aaKnown RBP eCLIP9.2□□□□□ -0.944e-7■■■■■ 29.4
NEDD4L-218ENST00000587547 LIG4P49917 911 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 GTF2BQ00403 316 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 POU5F1BQ06416 359 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 NFX1Q12986 1120 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 PAK2Q13177 524 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 PRPF4BQ13523 1007 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 BTG3Q14201 252 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 DPCR1Q3MIW9 517 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 FAM228AQ86W67 206 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 HVCN1Q96D96 273 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 CPB2Q96IY4 423 aa9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 TARS2Q9BW92 718 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-218ENST00000587547 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms