RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 IGFLR1Q9H665 355 aa23.25■■□□□ 1.31
RETREG3-204ENST00000586796 TRAF3IP3Q9Y228 551 aa23.25■■□□□ 1.31
RETREG3-204ENST00000586796 DERAQ9Y315 318 aa23.25■■□□□ 1.31
RETREG3-204ENST00000586796 C2CD2Q9Y426 696 aa23.25■■□□□ 1.31
RETREG3-204ENST00000586796 I3L4J1 428 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 SOD2P04179 222 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 CYP3A5P20815 502 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 BMP6P22004 513 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 MCM4P33991 863 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 SPATA1Q5VX52 437 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 LMBRD2Q68DH5 695 aaPredicted RBP23.24■■□□□ 1.31
RETREG3-204ENST00000586796 KLHL10Q6JEL2 608 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 ADSSL1Q8N142 457 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 HERC2P3Q9BVR0 1158 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 NGRNQ9NPE2 291 aaKnown RBP23.24■■□□□ 1.31
RETREG3-204ENST00000586796 DMAC2Q9NW81 257 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 NUB1Q9Y5A7 615 aa23.24■■□□□ 1.31
RETREG3-204ENST00000586796 SF3B1O75533 1304 aaKnown RBP eCLIP23.24■■□□□ 1.31
RETREG3-204ENST00000586796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.23■■□□□ 1.31
RETREG3-204ENST00000586796 HIDE1A8MVS5 230 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 PER2O15055 1255 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 DLATP10515 647 aaKnown RBP23.23■■□□□ 1.31
RETREG3-204ENST00000586796 CTSAP10619 480 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 CD44P16070 742 aaKnown RBP23.23■■□□□ 1.31
RETREG3-204ENST00000586796 NR2F2P24468 414 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 BRCC3P46736 316 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 CYP24A1Q07973 514 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 COBLL1Q53SF7 1204 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 FAM171A1Q5VUB5 890 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 PDE12Q6L8Q7 609 aaKnown RBP23.23■■□□□ 1.31
RETREG3-204ENST00000586796 KIAA1841Q6NSI8 718 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 CD300LGQ6UXG3 332 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 CEP57Q86XR8 500 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 FNBP1Q96RU3 617 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 TSG101Q99816 390 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 TLE6Q9H808 572 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 DPP3Q9NY33 737 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 STK39Q9UEW8 545 aa23.23■■□□□ 1.31
RETREG3-204ENST00000586796 URODP06132 367 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 RPL13P26373 211 aaKnown RBP23.22■■□□□ 1.31
RETREG3-204ENST00000586796 LRPAP1P30533 357 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 GTF2F1P35269 517 aaKnown RBP eCLIP23.22■■□□□ 1.31
RETREG3-204ENST00000586796 NRIP1P48552 1158 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 CASP4P49662 377 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 ADAM9Q13443 819 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 SURF1Q15526 300 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 EP400NLQ6ZTU2 488 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 SLC9A9Q8IVB4 645 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 MRPL43Q8N983 215 aaKnown RBP23.22■■□□□ 1.31
RETREG3-204ENST00000586796 CACTINQ8WUQ7 758 aaKnown RBP23.22■■□□□ 1.31
RETREG3-204ENST00000586796 PPP2R3CQ969Q6 453 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 EEF2KMTQ96G04 330 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 POP1Q99575 1024 aaKnown RBP23.22■■□□□ 1.31
RETREG3-204ENST00000586796 FRMD4BQ9Y2L6 1034 aa23.22■■□□□ 1.31
RETREG3-204ENST00000586796 TRIM49BA6NDI0 452 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 C2orf71A6NGG8 1288 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 TMEM189-UBE2V1I3L0A0 370 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 PSMA7O14818 248 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 PPEF2O14830 753 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 EFEMP2O95967 443 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 MBD3O95983 291 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 TMEM191BP0C7N4 346 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 TNNI1P19237 187 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 GLUD2P49448 558 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 PMS1P54277 932 aaKnown RBP23.21■■□□□ 1.31
RETREG3-204ENST00000586796 USP41Q3LFD5 358 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 ZCWPW2Q504Y3 356 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 C9orf57Q5W0N0 161 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 ANKRD40Q6AI12 368 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 CENPPQ6IPU0 288 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 NT5DC4Q86YG4 428 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 RNF168Q8IYW5 571 aaPredicted RBP23.21■■□□□ 1.31
RETREG3-204ENST00000586796 TRIML1Q8N9V2 468 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 MTMR12Q9C0I1 747 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 MRPL17Q9NRX2 175 aaKnown RBP23.21■■□□□ 1.31
RETREG3-204ENST00000586796 CTNND2Q9UQB3 1225 aa23.21■■□□□ 1.31
RETREG3-204ENST00000586796 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.21■■□□□ 1.31
RETREG3-204ENST00000586796 PDCD11Q14690 1871 aaKnown RBP23.2■■□□□ 1.3
RETREG3-204ENST00000586796 PTPRJQ12913 1337 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 TRAPPC3O43617 180 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 HYAL1Q12794 435 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 ELAVL2Q12926 359 aaKnown RBP23.2■■□□□ 1.3
RETREG3-204ENST00000586796 MYBPC2Q14324 1141 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 PSMD6Q15008 389 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 PTPN14Q15678 1187 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 OR5B17Q8NGF7 314 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 RIN2Q8WYP3 895 aaPredicted RBP23.2■■□□□ 1.3
RETREG3-204ENST00000586796 DHTKD1Q96HY7 919 aaPredicted RBP23.2■■□□□ 1.3
RETREG3-204ENST00000586796 ANKRD36BP1Q96IX9 119 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 MFSD14AQ96MC6 490 aa23.2■■□□□ 1.3
RETREG3-204ENST00000586796 ANK1P16157 1881 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 TRANK1O15050 2925 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 PRRC2BQ5JSZ5 2229 aaKnown RBP23.19■■□□□ 1.3
RETREG3-204ENST00000586796 ITGB3P05106 788 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 KRT19P08727 400 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 CCNE1P24864 410 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 PPP1R2P41236 205 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 NFIL3Q16649 462 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms