RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ADH1AP07327 375 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 MYBP10242 640 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 IDEP14735 1019 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CYP3A5P20815 502 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 FGFR3P22607 806 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CMA1P23946 247 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ADSSP30520 456 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 RPL9P32969 192 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ITIH3Q06033 890 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 PPP2R3AQ06190 1150 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CCDC173Q0VFZ6 552 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CBX2Q14781 532 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ADALQ6DHV7 355 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 SLFN12LQ6IEE8 588 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 LILRA6Q6PI73 481 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 DCLRE1AQ6PJP8 1040 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CRELD2Q6UXH1 353 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 EPM2AIP1Q7L775 607 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 GAS2L3Q86XJ1 694 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 CMASQ8NFW8 434 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 LNX1Q8TBB1 728 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 HASPINQ8TF76 798 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 C18orf25Q96B23 403 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 DHX58Q96C10 678 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 POP1Q99575 1024 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 C7orf25Q9BPX7 421 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.9
ATG4D-202ENST00000585437 TTPALQ9BTX7 342 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 MSTO1Q9BUK6 570 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 ADAM7Q9H2U9 754 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 SFXN1Q9H9B4 322 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 TUBGCP4Q9UGJ1 667 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 PTPRDP23468 1912 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 DENND4CQ5VZ89 1909 aa9.4□□□□□ -0.9
ATG4D-202ENST00000585437 UBE4BO95155 1302 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PODXLO00592 558 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 C2CD2LO14523 706 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 TADA2AO75478 443 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 B3GAT3O94766 335 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 GCNT3O95395 438 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PFKFB1P16118 471 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 GARTP22102 1010 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 LRPAP1P30533 357 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 CA8P35219 290 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 HOXD13P35453 343 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 AMPD3Q01432 767 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PSMD5Q16401 504 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 FAM171A1Q5VUB5 890 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PDXDC1Q6P996 788 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PRSS55Q6UWB4 352 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 UNC13DQ70J99 1090 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 CD302Q8IX05 232 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 CCDC65Q8IXS2 484 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 GJD3Q8N144 294 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 GLIS3Q8NEA6 775 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 FEZF2Q8TBJ5 459 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 HDAC7Q8WUI4 952 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 RIN2Q8WYP3 895 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 CLSTN3Q9BQT9 956 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 TBC1D7Q9P0N9 293 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 AGO2Q9UKV8 859 aaKnown RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 UBQLN1Q9UMX0 589 aaKnown RBP9.39□□□□□ -0.91
ATG4D-202ENST00000585437 DERAQ9Y315 318 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
ATG4D-202ENST00000585437 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 SYN3O14994 580 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TGM5O43548 720 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 KLRC4O43908 158 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 GLUD1P00367 558 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 KLRC2P26717 231 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 TKTP29401 623 aaKnown RBP9.38□□□□□ -0.91
ATG4D-202ENST00000585437 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATG4D-202ENST00000585437 BRCC3P46736 316 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 ASIC1P78348 528 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 BMT2Q1RMZ1 405 aa9.38□□□□□ -0.91
ATG4D-202ENST00000585437 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms