RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ERP44Q9BS26 406 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SUN1O94901 812 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MTMR3Q13615 1198 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 IL23RQ5VWK5 629 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNRNP48Q6IEG0 339 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ARHGAP24Q8N264 748 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SUN5Q8TC36 379 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 IDI2Q9BXS1 227 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RSPH9Q9H1X1 276 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PI4KBQ9UBF8 816 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TFR2Q9UP52 801 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SBF1O95248 1867 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 UNC5CO95185 931 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 OAS1P00973 400 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CHN1P15882 459 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 IRF5Q13568 498 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SH3RF1Q7Z6J0 888 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 AGGF1Q8N302 714 aaeCLIP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 IKBKGQ9Y6K9 419 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NUMBLQ9Y6R0 609 aa12.61□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDX5P17844 614 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ECE1P42892 770 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RCAN1P53805 252 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HERVK_113P62684 666 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PFKPQ01813 784 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DPYDQ12882 1025 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDHD1Q8NEL9 900 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ATXN2LQ8WWM7 1075 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DGCR14Q96DF8 476 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TCF12Q99081 682 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HACL1Q9UJ83 578 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZNF536O15090 1300 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ANKRD34BA5PLL1 514 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 STRNO43815 780 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GRIN3BO60391 1043 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ENTPD5O75356 428 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GTF2H1P32780 548 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HIRAP54198 1017 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FUT2Q10981 343 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZNF174Q15697 407 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PCSK7Q16549 785 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 KCTD21Q4G0X4 260 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PCNX4Q63HM2 1172 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SIGIRRQ6IA17 410 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZNF662Q6ZS27 426 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ANO5Q75V66 913 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FITM2Q8N6M3 262 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NRG4Q8WWG1 115 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.394e-10■□□□□ 9.4
CDK5RAP3-232ENST00000584168 CHP1Q99653 195 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EPB41L1Q9H4G0 881 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SNX9Q9Y5X1 595 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MYH6P13533 1939 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PCNTO95613 3336 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NPHP3-ACAD11A0A0J9YXS1 232 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CDC25AP30304 524 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 KRT2P35908 639 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PAFAH1B1P43034 410 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ANGEL2Q5VTE6 544 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 LRRC74BQ6ZQY2 392 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CROCCP3Q8IVE0 287 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZNF184Q99676 751 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VPS16Q9H269 839 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms