RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GRIK3Q13003 919 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 NR5A1Q13285 461 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 TFDP1Q14186 410 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 MXD4Q14582 209 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PCBP1Q15365 356 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 RTP2Q5QGT7 225 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PRSS55Q6UWB4 352 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 CYP26C1Q6V0L0 522 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PHTF2Q8N3S3 785 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 KCNG4Q8TDN1 519 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 HASPINQ8TF76 798 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 UBXN4Q92575 508 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 NAP1L4Q99733 375 aaKnown RBP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 EIF2AK1Q9BQI3 630 aaKnown RBP8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PAAF1Q9BRP4 392 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 COLEC11Q9BWP8 271 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PDRG1Q9NUG6 133 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 ZDHHC7Q9NXF8 308 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 FKBPLQ9UIM3 349 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 ADAM28Q9UKQ2 775 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 NUMBLQ9Y6R0 609 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 OTOGLQ3ZCN5 2332 aa8.64□□□□□ -1.03
SMCHD1-210ENST00000583800 A0A087WWV3 80 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 CASTOR2A6NHX0 329 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 USO1O60763 962 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 LRRN2O75325 713 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 CDKL5O76039 1030 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 DXOO77932 396 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 PAPLNO95428 1278 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 CTDNEP1O95476 244 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 LAMP2P13473 410 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 XBP1P17861 261 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 ARL2P36404 184 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 RARRES1P49788 294 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 NTHL1P78549 312 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 NCBP1Q09161 790 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 DPYDQ12882 1025 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 HTR4Q13639 388 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 USP41Q3LFD5 358 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 SLC27A1Q6PCB7 646 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 LILRA6Q6PI73 481 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 ERMP1Q7Z2K6 904 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 SLFN12Q8IYM2 578 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 HACE1Q8IYU2 909 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 HDAC7Q8WUI4 952 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 CCDC43Q96MW1 224 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 RPP25Q9BUL9 199 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 TM6SF1Q9BZW5 370 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 FOXQ1Q9C009 403 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 POLR3FQ9H1D9 316 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 DLGAP2Q9P1A6 1054 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 FNIP2Q9P278 1114 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 FBXW11Q9UKB1 542 aa8.63□□□□□ -1.03
SMCHD1-210ENST00000583800 CACNA1AO00555 2505 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 ZNF292O60281 2723 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 SF3B1O75533 1304 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 LRRIQ4A6NIV6 560 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 ANHXE9PGG2 379 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 TADA2AO75478 443 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 KIF4AO95239 1232 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 LYPLA2O95372 231 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 BAG4O95429 457 aaKnown RBP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 LMNAP02545 664 aaKnown RBP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 GLULP15104 373 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 FSHRP23945 695 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 KRT2P35908 639 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 WNT7BP56706 349 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 CREMQ03060 361 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 POU5F1BQ06416 359 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 TUSC3Q13454 348 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 HSP90AA2PQ14568 343 aaPredicted RBP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 CALCRLQ16602 461 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 DCLRE1AQ6PJP8 1040 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 PARM1Q6UWI2 310 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 MAEAQ7L5Y9 396 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 GRASPQ7Z6J2 395 aaPredicted RBP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 CEP57Q86XR8 500 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 PIGOQ8TEQ8 1089 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 FGF14Q92915 247 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 RMDN1Q96DB5 314 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 HSD17B14Q9BPX1 270 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 NFKBIZQ9BYH8 718 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 CXCL16Q9H2A7 254 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 GPRC5CQ9NQ84 441 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 SLC2A4RGQ9NR83 387 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 SIT1Q9Y3P8 196 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 CITO14578 2027 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 PDCD11Q14690 1871 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms