RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 VIPR2P41587 438 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 MBTD1Q05BQ5 628 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASC3-208ENST00000583649 PPP2R5CQ13362 524 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 CREB3L3Q68CJ9 461 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 TPGS2Q68CL5 300 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 SLC8B1Q6J4K2 584 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 Q6ZS52 159 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 PRMT7Q9NVM4 692 aaPredicted RBP12.29□□□□□ -0.44
CASC3-208ENST00000583649 THG1LQ9NWX6 298 aaKnown RBP12.29□□□□□ -0.44
CASC3-208ENST00000583649 DDX25Q9UHL0 483 aaKnown RBP12.29□□□□□ -0.44
CASC3-208ENST00000583649 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 GIPC1O14908 333 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 N4BP3O15049 544 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 DGAT1O75907 488 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 SEC24BO95487 1268 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 MYL4P12829 197 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
CASC3-208ENST00000583649 ARPP19P56211 112 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 ROR1Q01973 937 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 PLD1Q13393 1074 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 GJA10Q969M2 543 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 LXNQ9BS40 222 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
CASC3-208ENST00000583649 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 INSL5Q9Y5Q6 135 aa12.28□□□□□ -0.44
CASC3-208ENST00000583649 ARNTLO00327 626 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 ABLIM3O94929 683 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 FGF19O95750 216 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 CDC27P30260 824 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 GBP1P32455 592 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
CASC3-208ENST00000583649 FCHO2Q0JRZ9 810 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 LMAN2Q12907 356 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 CCINQ13939 588 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 KRT32Q14532 448 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 PON2Q15165 354 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 PLK5Q496M5 336 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 CCDC26Q8TAB7 109 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 ETNPPLQ8TBG4 499 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
CASC3-208ENST00000583649 NAP1L4Q99733 375 aaKnown RBP12.27□□□□□ -0.45
CASC3-208ENST00000583649 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 SMOC1Q9H4F8 434 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 CACNG4Q9UBN1 327 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 WASF3Q9UPY6 502 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 WDR81Q562E7 1941 aa12.27□□□□□ -0.45
CASC3-208ENST00000583649 BCLAF3A2AJT9 711 aaKnown RBP12.26□□□□□ -0.45
CASC3-208ENST00000583649 SYN3O14994 580 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 RECQL4O94761 1208 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
CASC3-208ENST00000583649 TDP2O95551 362 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
CASC3-208ENST00000583649 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 EPHA7Q15375 998 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 AMHR2Q16671 573 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 ARHGAP15Q53QZ3 475 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 ZSWIM3Q96MP5 696 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
CASC3-208ENST00000583649 C2orf40Q9H1Z8 148 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 SLC38A7Q9NVC3 462 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 SNTG2Q9NY99 539 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 PCDHA4Q9UN74 947 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 F5P12259 2224 aa12.26□□□□□ -0.45
CASC3-208ENST00000583649 CEP295Q9C0D2 2601 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 LNP1A1A4G5 178 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 LRRIQ4A6NIV6 560 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 B4GALT5O43286 388 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 EXTL3O43909 919 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 IGHDP01880 384 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 GCFC2P16383 781 aaKnown RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 SOX9P48436 509 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 PXNP49023 591 aaPredicted RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 EPHB3P54753 998 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 EPHA5P54756 1037 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 TWF1Q12792 350 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 CAPSQ13938 189 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 TEAD2Q15562 447 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 ITPRIPL2Q3MIP1 535 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 FBXO43Q4G163 708 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 TCEAL6Q6IPX3 200 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 CDR2LQ86X02 465 aaPredicted RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms