RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CCSER1Q9C0I3 900 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 MFSD1Q9H3U5 465 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 WNT16Q9UBV4 365 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 CDY1Q9Y6F8 540 aa22.84■■□□□ 1.25
CCDC42-203ENST00000581598 NOTCH4Q99466 2003 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 I3L4J1 428 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 GALR2O43603 387 aaPredicted RBP22.83■■□□□ 1.25
CCDC42-203ENST00000581598 PIGRP01833 764 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 HARSP12081 509 aaKnown RBP22.83■■□□□ 1.25
CCDC42-203ENST00000581598 FSHRP23945 695 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 ABCD1P33897 745 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 GRIN1Q05586 938 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 KYAT1Q16773 422 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 GET4Q7L5D6 327 aaPredicted RBP22.83■■□□□ 1.25
CCDC42-203ENST00000581598 GRASPQ7Z6J2 395 aaPredicted RBP22.83■■□□□ 1.25
CCDC42-203ENST00000581598 SLC44A3Q8N4M1 653 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 SLC7A14Q8TBB6 771 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 PHOX2BQ99453 314 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 PARVGQ9HBI0 331 aa22.83■■□□□ 1.25
CCDC42-203ENST00000581598 TBC1D4O60343 1298 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 CLTAP09496 248 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 PLCG1P19174 1290 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 HTR4Q13639 388 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 MRPL58Q14197 206 aaKnown RBP22.82■■□□□ 1.24
CCDC42-203ENST00000581598 VARS2Q5ST30 1063 aaKnown RBP22.82■■□□□ 1.24
CCDC42-203ENST00000581598 CWF19L1Q69YN2 538 aaKnown RBP22.82■■□□□ 1.24
CCDC42-203ENST00000581598 RSAD2Q8WXG1 361 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 C18orf25Q96B23 403 aaPredicted RBP22.82■■□□□ 1.24
CCDC42-203ENST00000581598 SUSD3Q96L08 255 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 HAPLN2Q9GZV7 340 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 USP34Q70CQ2 3546 aa22.82■■□□□ 1.24
CCDC42-203ENST00000581598 TTC26A0AVF1 554 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 VPS37CA5D8V6 355 aaPredicted RBP22.81■■□□□ 1.24
CCDC42-203ENST00000581598 NARSO43776 548 aaKnown RBP22.81■■□□□ 1.24
CCDC42-203ENST00000581598 ABLIM3O94929 683 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 FAM13AO94988 1023 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 SRFP11831 508 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 NPR3P17342 541 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 MCM6Q14566 821 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 KARSQ15046 597 aaKnown RBP22.81■■□□□ 1.24
CCDC42-203ENST00000581598 PTPAQ15257 358 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 MYCT1Q8N699 235 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 ZNF461Q8TAF7 563 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 LARP4BQ92615 738 aaKnown RBP22.81■■□□□ 1.24
CCDC42-203ENST00000581598 BICD1Q96G01 975 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 TSPAN18Q96SJ8 248 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 FBXL21Q9UKT6 434 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 CDH7Q9ULB5 785 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 TBX20Q9UMR3 447 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 NUB1Q9Y5A7 615 aa22.81■■□□□ 1.24
CCDC42-203ENST00000581598 H7C4K7 107 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 CCL16O15467 120 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 CXCL8P10145 99 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 AOC1P19801 751 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 CYP3A5P20815 502 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 SYT1P21579 422 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 LRPAP1P30533 357 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 LIG4P49917 911 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 ROR1Q01973 937 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 ZBTB6Q15916 424 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 SEZ6Q53EL9 994 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 RASSF8Q8NHQ8 419 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 FIZ1Q96SL8 496 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 KCNH3Q9ULD8 1083 aa22.8■■□□□ 1.24
CCDC42-203ENST00000581598 CIZ1Q9ULV3 898 aaPredicted RBP22.8■■□□□ 1.24
CCDC42-203ENST00000581598 MORC2Q9Y6X9 1032 aaPredicted RBP22.8■■□□□ 1.24
CCDC42-203ENST00000581598 ARHGEF37A1IGU5 675 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 K7ENM7 598 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 TRAK2O60296 914 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 FAM189A1O60320 539 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 ADRB2P07550 413 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 PDIA4P13667 645 aaKnown RBP22.79■■□□□ 1.24
CCDC42-203ENST00000581598 MATR3P43243 847 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC42-203ENST00000581598 DHX8Q14562 1220 aaKnown RBP22.79■■□□□ 1.24
CCDC42-203ENST00000581598 SIX5Q8N196 739 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 RTP3Q9BQQ7 232 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 AVENQ9NQS1 362 aaPredicted RBP22.79■■□□□ 1.24
CCDC42-203ENST00000581598 SLC2A4RGQ9NR83 387 aa22.79■■□□□ 1.24
CCDC42-203ENST00000581598 WDR27A2RRH5 827 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 HNRNPDLO14979 420 aaKnown RBP22.78■■□□□ 1.24
CCDC42-203ENST00000581598 OGTO15294 1046 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 ATF2P15336 505 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 NTHL1P78549 312 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 GTF2BQ00403 316 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 RESTQ13127 1097 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 TCEAL8Q8IYN2 117 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 APPL2Q8NEU8 664 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 FLCNQ8NFG4 579 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 FGF13Q92913 245 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 ST6GALNAC4Q9H4F1 302 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 DNMT3BQ9UBC3 853 aaKnown RBP22.78■■□□□ 1.24
CCDC42-203ENST00000581598 TUBGCP4Q9UGJ1 667 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 MAFFQ9ULX9 164 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 UBQLN1Q9UMX0 589 aaKnown RBP22.78■■□□□ 1.24
CCDC42-203ENST00000581598 PCDHB8Q9UN66 801 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 POLIQ9UNA4 740 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 SRPRBQ9Y5M8 271 aaKnown RBP22.78■■□□□ 1.24
CCDC42-203ENST00000581598 CLIC4Q9Y696 253 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 NUMBLQ9Y6R0 609 aa22.78■■□□□ 1.24
CCDC42-203ENST00000581598 MYH15Q9Y2K3 1946 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms