RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 AKAP5P24588 427 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
SKA2-206ENST00000581068 SOX5P35711 763 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 ALKAL1Q6UXT8 129 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 MRPL10Q7Z7H8 261 aaKnown RBP11.89□□□□□ -0.51
SKA2-206ENST00000581068 CCDC170Q8IYT3 715 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 BEST2Q8NFU1 509 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 TAF4BQ92750 862 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 TATDN2Q93075 761 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 PI4K2AQ9BTU6 479 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 C11orf49Q9H6J7 331 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 FAM105AQ9NUU6 356 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
SKA2-206ENST00000581068 HES2Q9Y543 173 aa11.89□□□□□ -0.51
SKA2-206ENST00000581068 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
SKA2-206ENST00000581068 F8VZ95 297 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 CCP110O43303 1012 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 XPOTO43592 962 aaKnown RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 ZNF623O75123 536 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 KCNE1P15382 129 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 ATICP31939 592 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 MYL6P60660 151 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 RBP5P82980 135 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 GCNT1Q02742 428 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 TLE2Q04725 743 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 KLHL30Q0D2K2 578 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 MBTPS1Q14703 1052 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 SMYD5Q6GMV2 418 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 RAD9BQ6WBX8 426 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 C1orf127Q8N9H9 656 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 PGBD4Q96DM1 585 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 KREMEN1Q96MU8 473 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 ADAM2Q99965 735 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.517e-8■■■■■ 186.3
SKA2-206ENST00000581068 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 DPP3Q9NY33 737 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 ITGA11Q9UKX5 1188 aa11.88□□□□□ -0.51
SKA2-206ENST00000581068 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
SKA2-206ENST00000581068 A0A0U1RQF3 1178 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 SSU72P8A0A1W2PR75 194 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 FOXN3O00409 490 aaPredicted RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 ZSCAN12O43309 604 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 MGEA5O60502 916 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 GFPT2O94808 682 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 CLSTN1O94985 981 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 ITGB3P05106 788 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 KRT19P08727 400 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 PRKCIP41743 596 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 ARID5AQ03989 594 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 MTF1Q14872 753 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 TRIM60Q495X7 471 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 HGSNATQ68CP4 663 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 SHC3Q92529 594 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 KAT5Q92993 513 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 FAXDC2Q96IV6 333 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 FTHL17Q9BXU8 183 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 DEF6Q9H4E7 631 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 APOBEC3GQ9HC16 384 aaKnown RBP11.87□□□□□ -0.51
SKA2-206ENST00000581068 UBN1Q9NPG3 1134 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 RGS18Q9NS28 235 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 KLK14Q9P0G3 267 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 SIX4Q9UIU6 781 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
SKA2-206ENST00000581068 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 EIF3CLB5ME19 914 aaKnown RBP11.86□□□□□ -0.51
SKA2-206ENST00000581068 AKR1B10O60218 316 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 ZNF500O60304 480 aaPredicted RBP11.86□□□□□ -0.51
SKA2-206ENST00000581068 NDUFA10O95299 355 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 STAU1O95793 577 aaKnown RBP11.86□□□□□ -0.51
SKA2-206ENST00000581068 CYP3A5P20815 502 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 ANXA13P27216 316 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 USP8P40818 1118 aa11.86□□□□□ -0.51
SKA2-206ENST00000581068 KRT83P78385 493 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms