RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZBED6P86452 979 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 CACNB2Q08289 660 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 ITGA9Q13797 1035 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 FAM47EQ6ZV65 393 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 TRIM48Q8IWZ4 208 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ALDH16A1Q8IZ83 802 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 JADE3Q92613 823 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 CENPTQ96BT3 561 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 EDC3Q96F86 508 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 PPP1R36Q96LQ0 422 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 GINS4Q9BRT9 223 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 FOXP1Q9H334 677 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 UNC45AQ9H3U1 944 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 EHD2Q9NZN4 543 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ATF5Q9Y2D1 282 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 SNX24Q9Y343 169 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZNF711Q9Y462 761 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 LRRC7Q96NW7 1537 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 A8MXQ7 604 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 TBC1D4O60343 1298 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PCCAP05165 728 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 COPZ1P61923 177 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ROR1Q01973 937 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PDAP1Q13442 181 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 UBE3CQ15386 1083 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZBTB38Q8NAP3 1195 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 CYP4F11Q9HBI6 524 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SOX13Q9UN79 622 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SETBP1Q9Y6X0 1596 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 NEURL1BA8MQ27 555 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 CCDC15Q0P6D6 951 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SPATS1Q496A3 300 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PTF1AQ7RTS3 328 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 VMP1Q96GC9 406 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 RNF26Q9BY78 433 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 GID8Q9NWU2 228 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PCSK1NQ9UHG2 260 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SMG5Q9UPR3 1016 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 ARHGEF11O15085 1522 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PXDNLA1KZ92 1463 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PSMD3O43242 534 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ATP9BO43861 1147 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 FCGR1AP12314 374 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 MLNP12872 115 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 TYK2P29597 1187 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 DLG4P78352 724 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 CDK17Q00537 523 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ALFQ53S48 1182 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 RARS2Q5T160 578 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 ARHGAP17Q68EM7 881 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 MTHFD1LQ6UB35 978 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PID1Q7Z2X4 250 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SPATA2LQ8IUW3 424 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 CAPN10Q9HC96 672 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 DDX56Q9NY93 547 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 PI4KBQ9UBF8 816 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 GTF2A1LQ9UNN4 478 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ALKBH5Q6P6C2 394 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 MCPH1Q8NEM0 835 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 THAP11Q96EK4 314 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 EHD1Q9H4M9 534 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 DHX35Q9H5Z1 703 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 FANCAO15360 1455 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PBRM1Q86U86 1689 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 TLR2O60603 784 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 FGGP02679 453 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ATP1A1P05023 1023 aaKnown RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 BRAFP15056 766 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 RAB14P61106 215 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 IRAK1BP1Q5VVH5 260 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 VPS50Q96JG6 964 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 AGBL1Q96MI9 1066 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZNF560Q96MR9 790 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 KLHL31Q9H511 634 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PLEKHA5Q9HAU0 1116 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 LMBRD1Q9NUN5 540 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 HOXC10Q9NYD6 342 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PKP3Q9Y446 797 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 CCDC22O60826 627 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ZC3H11AO75152 810 aaKnown RBP eCLIP5.37□□□□□ -1.55
NF1-219ENST00000579081 RASSF9O75901 435 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 BCAR1P56945 870 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 HIST2H2ACQ16777 129 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 HIST2H2AA3Q6FI13 130 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 DNAJB7Q7Z6W7 309 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 ZBED8Q8IZ13 594 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 RNF25Q96BH1 459 aaPredicted RBP5.37□□□□□ -1.55
NF1-219ENST00000579081 SGSM3Q96HU1 749 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 ARHGEF3Q9NR81 526 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 SERPINB13Q9UIV8 391 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 RWDD2AQ9UIY3 292 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 MAPRE3Q9UPY8 281 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 PLAAQ9Y263 795 aa5.37□□□□□ -1.55
NF1-219ENST00000579081 BBOX1O75936 387 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 MYL4P12829 197 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 MZF1P28698 734 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms