RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 UBQLN1Q9UMX0 589 aaKnown RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 NR2E1Q9Y466 385 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 MYO10Q9HD67 2058 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 ANKRD63C9JTQ0 380 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 TGM5O43548 720 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 LRPAP1P30533 357 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 TNFSF9P41273 254 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 BECN1Q14457 450 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 ZBTB6Q15916 424 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
SS18-212ENST00000579061 L1TD1Q5T7N2 865 aaKnown RBP16.16■□□□□ 0.18
SS18-212ENST00000579061 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 TMC5Q6UXY8 1006 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 C18orf25Q96B23 403 aaPredicted RBP16.16■□□□□ 0.18
SS18-212ENST00000579061 RPGRIP1Q96KN7 1286 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 CLSTN3Q9BQT9 956 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 POMKQ9H5K3 350 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 CPSF3Q9UKF6 684 aaKnown RBP16.16■□□□□ 0.18
SS18-212ENST00000579061 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
SS18-212ENST00000579061 SYN3O14994 580 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 GPR37L1O60883 481 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 GCNT3O95395 438 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
SS18-212ENST00000579061 IGFBP6P24592 240 aaPredicted RBP16.15■□□□□ 0.18
SS18-212ENST00000579061 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 ANKS3Q6ZW76 656 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 PALB2Q86YC2 1186 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 DHX58Q96C10 678 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 TRIM9Q9C026 710 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 ASB7Q9H672 318 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 ZDHHC7Q9NXF8 308 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 MTRRQ9UBK8 725 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 AGO2Q9UKV8 859 aaKnown RBP16.15■□□□□ 0.18
SS18-212ENST00000579061 USTQ9Y2C2 406 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 DERAQ9Y315 318 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 BACE2Q9Y5Z0 518 aa16.15■□□□□ 0.18
SS18-212ENST00000579061 POLR2DO15514 142 aaKnown RBP16.14■□□□□ 0.17
SS18-212ENST00000579061 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
SS18-212ENST00000579061 BRCC3P46736 316 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 KRT85P78386 507 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 RAB33AQ14088 237 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 ZBTB41Q5SVQ8 909 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 STXBP4Q6ZWJ1 553 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 KREMEN2Q8NCW0 462 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 POMGNT1Q8WZA1 660 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 STAMQ92783 540 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 SUSD3Q96L08 255 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 C7orf25Q9BPX7 421 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 CDH22Q9UJ99 828 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
SS18-212ENST00000579061 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 MYBP10242 640 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 GARTP22102 1010 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 PAX3P23760 479 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 ADSSP30520 456 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 KCNA1Q09470 495 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 SPATA1Q5VX52 437 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 RTL10Q7L3V2 364 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 LEO1Q8WVC0 666 aaPredicted RBP16.13■□□□□ 0.17
SS18-212ENST00000579061 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 TUBGCP4Q9UGJ1 667 aa16.13■□□□□ 0.17
SS18-212ENST00000579061 TISP43B9A030 160 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 H7C4K7 107 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 I3L4J1 428 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 ZMYND10O75800 440 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 LDHAP00338 332 aaKnown RBP16.12■□□□□ 0.17
SS18-212ENST00000579061 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 HOXA9P31269 272 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 AARSP49588 968 aaKnown RBP eCLIP16.12■□□□□ 0.17
SS18-212ENST00000579061 ACOT2P49753 483 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 CASP5P51878 434 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 ASIC1P78348 528 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 MRPL58Q14197 206 aaKnown RBP16.12■□□□□ 0.17
SS18-212ENST00000579061 TMEM31Q5JXX7 168 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 NT5DC4Q86YG4 428 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 ZDHHC14Q8IZN3 488 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 APPL2Q8NEU8 664 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 BEST2Q8NFU1 509 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 ZNF707Q96C28 371 aaPredicted RBP16.12■□□□□ 0.17
SS18-212ENST00000579061 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 MUTYHQ9UIF7 546 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 C2CD2Q9Y426 696 aa16.12■□□□□ 0.17
SS18-212ENST00000579061 TRIOO75962 3097 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 DOCK8Q8NF50 2099 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 C2CD4DB7Z1M9 353 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms