RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TSPAN18Q96SJ8 248 aa19.97■□□□□ 0.79
PRKCA-203ENST00000578063 ERVK-5Q9HDB9 667 aa19.97■□□□□ 0.79
PRKCA-203ENST00000578063 OFD1O75665 1012 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 RECQL4O94761 1208 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CDK7P50613 346 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 PTK2Q05397 1052 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 PAK2Q13177 524 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 SMYD5Q6GMV2 418 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 NYAP1Q6ZVC0 841 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 FAM71AQ8IYT1 594 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CAGE1Q8TC20 777 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 TAF4BQ92750 862 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 REXO2Q9Y3B8 237 aaKnown RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 IPPQ9Y573 584 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 ANK1P16157 1881 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 RALGAPA2Q2PPJ7 1873 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 RBAK-RBAKDNI3L0D1 243 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 KIF2AO00139 706 aaPredicted RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CLSTN1O94985 981 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 GHRP10912 638 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CKBP12277 381 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 LBX1P52954 281 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CUL2Q13617 745 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 PTPN14Q15678 1187 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 PKN2Q16513 984 aaKnown RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 ZNF618Q5T7W0 954 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 HACE1Q8IYU2 909 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 C1orf127Q8N9H9 656 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 ZNF333Q96JL9 665 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 C16orf45Q96MC5 204 aaPredicted RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 AGO3Q9H9G7 860 aaKnown RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 APOBEC3GQ9HC16 384 aaKnown RBP19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CNTN3Q9P232 1028 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 ITGA11Q9UKX5 1188 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 HES2Q9Y543 173 aa19.96■□□□□ 0.79
PRKCA-203ENST00000578063 CST3P01034 146 aaPredicted RBP19.95■□□□□ 0.78
PRKCA-203ENST00000578063 ZSCAN20P17040 1043 aaPredicted RBP19.95■□□□□ 0.78
PRKCA-203ENST00000578063 CTCFP49711 727 aaPredicted RBP19.95■□□□□ 0.78
PRKCA-203ENST00000578063 MYL6P60660 151 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 LPIN1Q14693 890 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 SLC18A3Q16572 532 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 ZNF699Q32M78 642 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 SPOPLQ6IQ16 392 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 ZNF571Q7Z3V5 609 aaPredicted RBP19.95■□□□□ 0.78
PRKCA-203ENST00000578063 TXLNBQ8N3L3 684 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 KIF12Q96FN5 646 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 CRISPLD2Q9H0B8 497 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 LUC7LQ9NQ29 371 aaKnown RBP19.95■□□□□ 0.78
PRKCA-203ENST00000578063 PADI3Q9ULW8 664 aa19.95■□□□□ 0.78
PRKCA-203ENST00000578063 TUBB4AP04350 444 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 CD52P31358 61 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 ALKAL1Q6UXT8 129 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 ZNF662Q6ZS27 426 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 KIAA1328Q86T90 577 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 FAM126BQ8IXS8 530 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 SMG8Q8ND04 991 aaKnown RBP19.94■□□□□ 0.78
PRKCA-203ENST00000578063 FAXDC2Q96IV6 333 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.94■□□□□ 0.78
PRKCA-203ENST00000578063 APOL6Q9BWW8 343 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 NIF3L1Q9GZT8 377 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 SIX4Q9UIU6 781 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 R3HCC1Q9Y3T6 440 aaKnown RBP19.94■□□□□ 0.78
PRKCA-203ENST00000578063 NUB1Q9Y5A7 615 aa19.94■□□□□ 0.78
PRKCA-203ENST00000578063 KRT19P08727 400 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ATICP31939 592 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 USP8P40818 1118 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 RAB27AP51159 221 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 VAV2P52735 878 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 GFPT1Q06210 699 aaPredicted RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 BMS1Q14692 1282 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ARHGAP29Q52LW3 1261 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 XKR4Q5GH76 650 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ARMC5Q96C12 935 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 TRAIPQ9BWF2 469 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 IFIH1Q9BYX4 1025 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 XYLT2Q9H1B5 865 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 FAM105AQ9NUU6 356 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 PARP2Q9UGN5 583 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ADAMTS1Q9UHI8 967 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 PCDHB2Q9Y5E7 798 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ZNF263O14978 683 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ITGB3P05106 788 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 AKAP5P24588 427 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 CYP27A1Q02318 531 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 BFSP2Q13515 415 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 DNTTIP2Q5QJE6 756 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 TRAF7Q6Q0C0 670 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 BEST2Q8NFU1 509 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 CXorf38Q8TB03 319 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 U2AF1L4Q8WU68 220 aaKnown RBP19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ELMO3Q96BJ8 720 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 ARID3AQ99856 593 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 VRTNQ9H8Y1 702 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 DPP3Q9NY33 737 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 PCDHA13Q9Y5I0 950 aa19.93■□□□□ 0.78
PRKCA-203ENST00000578063 A0A087X0T9 212 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 XPOTO43592 962 aaKnown RBP19.92■□□□□ 0.78
PRKCA-203ENST00000578063 SGPL1O95470 568 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms