RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PHLDB3Q6NSJ2 640 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 MTSS1LQ765P7 747 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 CD302Q8IX05 232 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 FEZF2Q8TBJ5 459 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 RABGGTAQ92696 567 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 CACNG4Q9UBN1 327 aa15.84■□□□□ 0.13
SMARCE1-213ENST00000578044 F5P12259 2224 aa15.83■□□□□ 0.13
SMARCE1-213ENST00000578044 PODXLO00592 558 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 XPOTO43592 962 aaKnown RBP15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 SPATA31D3P0C874 917 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 ATF2P15336 505 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 FSHRP23945 695 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 GLRA4Q5JXX5 417 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 SPATA31D4Q6ZUB0 917 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 HAUS6Q7Z4H7 955 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 ALYREFQ86V81 257 aaKnown RBP15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 TCEAL8Q8IYN2 117 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 TMEM105Q8N8V8 129 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 C3orf58Q8NDZ4 430 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 APPL2Q8NEU8 664 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 HASPINQ8TF76 798 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 MFSD1Q9H3U5 465 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 POLD4Q9HCU8 107 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 BLOC1S4Q9NUP1 217 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 GDE1Q9NZC3 331 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 WDR87Q6ZQQ6 2873 aa15.83■□□□□ 0.12
SMARCE1-213ENST00000578044 MYH15Q9Y2K3 1946 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 SFI1A8K8P3 1242 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 FAM189A1O60320 539 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 NPR3P17342 541 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 TKTP29401 623 aaKnown RBP15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 REEP2Q9BRK0 252 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 STK17AQ9UEE5 414 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 TBX20Q9UMR3 447 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 CDY1Q9Y6F8 540 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 GVINP1Q7Z2Y8 2422 aa15.82■□□□□ 0.12
SMARCE1-213ENST00000578044 M0QZQ0 153 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 OGTO15294 1046 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 MEFVO15553 781 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 ADAM12O43184 909 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 OAZ2O95190 189 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 DMDP11532 3685 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 DDIT3P35638 169 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 NBL1P41271 181 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 GTF2BQ00403 316 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 VARS2Q5ST30 1063 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 RSPO2Q6UXX9 243 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 GRASPQ7Z6J2 395 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 LEMD2Q8NC56 503 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 SLC7A14Q8TBB6 771 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 LARP4BQ92615 738 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 RAD54LQ92698 747 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 HVCN1Q96D96 273 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 BORCS6Q96GS4 357 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 FIZ1Q96SL8 496 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 SMOC2Q9H3U7 446 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 UBQLN1Q9UMX0 589 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 DERAQ9Y315 318 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 NUB1Q9Y5A7 615 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 STYXL1Q9Y6J8 313 aa15.81■□□□□ 0.12
SMARCE1-213ENST00000578044 A0A0B4J269 797 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 TRAK2O60296 914 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 ROR1Q01973 937 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 PTPAQ15257 358 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 GPBP1Q86WP2 473 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 MAP4K3Q8IVH8 894 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 CCDC105Q8IYK2 499 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 FGF13Q92913 245 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 SHDQ96IW2 340 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 ZBTB45Q96K62 511 aaPredicted RBP15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 HSFX1Q9UBD0 423 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 AFF4Q9UHB7 1163 aaKnown RBP15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 FBXL21Q9UKT6 434 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 SRPRBQ9Y5M8 271 aaKnown RBP15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 CACNA1IQ9P0X4 2223 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 FANCMQ8IYD8 2048 aa15.8■□□□□ 0.12
SMARCE1-213ENST00000578044 ZNF292O60281 2723 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 SPTBN4Q9H254 2564 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 HNRNPDLO14979 420 aaKnown RBP15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 FAM13AO94988 1023 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 PLCG1P19174 1290 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 BRCC3P46736 316 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 LIG4P49917 911 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 STARD6P59095 220 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 OSTNP61366 133 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 PFKPQ01813 784 aa15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 PABPC1LQ4VXU2 614 aaKnown RBP15.79■□□□□ 0.12
SMARCE1-213ENST00000578044 SLFN12LQ6IEE8 588 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms