RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 MCM2P49736 904 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SMTNP53814 917 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ROR1Q01973 937 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ARSHQ5FYA8 562 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 VARS2Q5ST30 1063 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SLC8B1Q6J4K2 584 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ZPBP2Q6X784 338 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 RTL10Q7L3V2 364 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ITFG1Q8TB96 612 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 FGF13Q92913 245 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 FGF14Q92915 247 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 AK8Q96MA6 479 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SLC2A4RGQ9NR83 387 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 HCFC1R1Q9NWW0 138 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CA14Q9ULX7 337 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SMC3Q9UQE7 1217 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SPTBN4Q9H254 2564 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SYN3O14994 580 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SLC26A4O43511 780 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 NCKAP1LP55160 1127 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 MCL1Q07820 350 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SLC10A6Q3KNW5 377 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SEZ6Q53EL9 994 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 PARM1Q6UWI2 310 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 LRRC15Q8TF66 581 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 KCNN1Q92952 543 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 TBC1D32Q96NH3 1257 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 RPP25Q9BUL9 199 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ARHGEF3Q9NR81 526 aa18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 LARSQ9P2J5 1176 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 DNMT3BQ9UBC3 853 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-206ENST00000578018 WDR27A2RRH5 827 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 TBC1D4O60343 1298 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CXCL8P10145 99 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 PABPC1LQ4VXU2 614 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 NPAS3Q8IXF0 933 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 DTWD2Q8NBA8 298 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ZNF461Q8TAF7 563 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 REEP2Q9BRK0 252 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 BACH2Q9BYV9 841 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 HAPLN2Q9GZV7 340 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 TUBGCP4Q9UGJ1 667 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 KCNH3Q9ULD8 1083 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ODF2LQ9ULJ1 636 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 NUB1Q9Y5A7 615 aa18.17■□□□□ 0.5
CDK5RAP3-206ENST00000578018 MIA3Q5JRA6 1907 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ARHGEF37A1IGU5 675 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 H0YCG3 227 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CLDN3O15551 220 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ABLIM3O94929 683 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 RFX1P22670 979 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 MRPL58Q14197 206 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 LARP1BQ659C4 914 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 MTSS1LQ765P7 747 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 HAUS6Q7Z4H7 955 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 GPBP1Q86WP2 473 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SUSD3Q96L08 255 aa18.16■□□□□ 0.5
CDK5RAP3-206ENST00000578018 COL4A3Q01955 1670 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 STK25O00506 426 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 MCM4P33991 863 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 UBA7P41226 1012 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ZNF131P52739 623 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 GRIN1Q05586 938 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ANGPT1Q15389 498 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 SLC5A9Q2M3M2 681 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ASCL5Q7RTU5 278 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 TMEM130Q8N3G9 435 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ING5Q8WYH8 240 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 BICD1Q96G01 975 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 FBXL5Q9UKA1 691 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CACNA1IQ9P0X4 2223 aa18.15■□□□□ 0.5
CDK5RAP3-206ENST00000578018 EP300Q09472 2414 aaPredicted RBP18.14■□□□□ 0.5
CDK5RAP3-206ENST00000578018 WDR87Q6ZQQ6 2873 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 TTC26A0AVF1 554 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 PRR23AA6NEV1 266 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 H7C4K7 107 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 K7ENM7 598 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 PRRG1O14668 218 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 FAM189A1O60320 539 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 BMP15O95972 392 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 PIGRP01833 764 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 RHOP08100 348 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 CLTAP09496 248 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 ATF2P15336 505 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 PLCG1P19174 1290 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 TNFSF9P41273 254 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 MATR3P43243 847 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 GPC5P78333 572 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 FRMD5Q7Z6J6 570 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
CDK5RAP3-206ENST00000578018 DDX12PQ92771 950 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms